Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1259 ATGGAATCTACAACCTTCGCCAGTTTCAGAGCCTCTTCTCCTCATTCGATGCAACAACCTTATCTTCTGAGACCCTCTCCTTTACCCTCTCACCTTCGAATTTTGAAATTGAGGCGTTTTGGTTTGGATAAGAATCGTTTAGTTGCTCGTTGCTCTTCTGGTTCCGATGAATTTGTTCCTTTCAATGGGTTGCACTTCGCACCGAACAAGCTCTTCAGGCAGGAGGCTATTGGAGCTGAATATGGGGAAGGCTTTGAGACTTTCAGGACGGATGGACCATTGCAAGTTGATGTGGACTACTTGAATGACAAGTTGCAAGATGGTTTTCTTCAGCGCATTCGCTATGCCATGAAGCCGGATGAAGCCTATGGTCTTATCTTCTCTTGGGACAATGTGGTGGCTGATACCCGAGCTCTGAAGAGGAAGGCGTGGAAGGAGCTGGCCTTGGAAGAAGGAAAGGATATTCCTGAAGATGATGATATGCAAAGATTGGCACTTTATGCAGGTGTTGATGATGTGTTGCATAAGCAGCATTTCCTCTCAGACAAGGCAGAAAATGAGATGGAGAGACTAAAGTTAAGGTTTTCTCAGTTATATTATGATAATCTTCTAAAGCTTGAAAGACCAATGGAGGGCCTCAGAGACTGGTTGGAAGCAGTTCATACAGCTCGAATTCCTTGTGCTGTTGTTTCAAGTCTTGATAGAAAAAATATGGTAGAAGCTTTGGAAAGGATGGAGCTCAACAAATATTTCCAGGCAGTTGTGACGGAAGAGGATGGAATGGAATCAATAGCTCATAGATTTCTTTCTGCTGCCGTCAAGCTTGATCGGAAACCCTCGAAGTGTGTTGTTTTTGAAGATGATCCTCGAGGAGTAACTGCTGCACACAATTGTACGATGATGGCTGTTGCATTAATTGGTGCTCATCCAGCGTATGATTTGGGGCAGGCTGATCTTGCAGTTGCTAACTTTAGTGAACTTTCTGTGATAAACTTGAGAAGATTATTTGCTAACAAGGGTTCTACGTTTATGGACCTGCAGAAGCAGATCATAGAGAAAGCTCCTCAGAAAAGGAAACTTACAATAGACACCATTTTCTAA 1101 0.4332 MESTTFASFRASSPHSMQQPYLLRPSPLPSHLRILKLRRFGLDKNRLVARCSSGSDEFVPFNGLHFAPNKLFRQEAIGAEYGEGFETFRTDGPLQVDVDYLNDKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVADTRALKRKAWKELALEEGKDIPEDDDMQRLALYAGVDDVLHKQHFLSDKAENEMERLKLRFSQLYYDNLLKLERPMEGLRDWLEAVHTARIPCAVVSSLDRKNMVEALERMELNKYFQAVVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAHPAYDLGQADLAVANFSELSVINLRRLFANKGSTFMDLQKQIIEKAPQKRKLTIDTIF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1259 366 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 366 - -
Ahy20g1259 366 Gene3D - 125 321 IPR023214 -
Ahy20g1259 366 Gene3D Putative phosphatase; domain 2 135 209 IPR023198 -
Ahy20g1259 366 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 189 303 IPR006439 -
Ahy20g1259 366 Pfam Haloacid dehalogenase-like hydrolase 125 304 IPR041492 -
Ahy20g1259 366 SUPERFAMILY HAD-like 97 327 IPR036412 -
Ahy20g1259 366 CDD HAD_BPGM-like 124 307 - -
Ahy20g1259 366 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1259 Ahy-Chr20 24692290 24696451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1259 - - gmx:100817685 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1259 20 24692290 24696451 Ahy10g0925 10 16685572 16689656 hybridization