Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1173 ATGAGACCAACTTTTTTCAACTCAAACAACAAAGCTTCAATGGCACTCTCCACAAGGTTCCTCCATCTCCTCTTCCTCCTCTCTCTATGCTTCATCACCACAACCGTCAGATCCGACGATGATTGTGTCTACACGGTTTACATCAGAACCGGTTCAATCATAAAGGGAGGAACCGATTCAATAATCGGTCTCAAGCTATACGACCAGTACGGCTACGGCATATACATAAAAAACTTGGAAGCATGGGGCGGGTTGATGGATCCCGGTTACAACTACTATGAGAGGGGCAATTTGGACATTTTCAGTGGCAGAGGCCCGTGTTTGAACGGGCCTGTTTGCGCTGTTAACTTGACTTCCGATGGGTCTGGAGACCACCACGGCTGGTACTGCAACTACGTCGAGGTAACTACCACTGGGGCCCACATACCCTGTGCCCAGCAACAGTTTACTATTGAGCAGTGGATCGCTACCGATACTTCGCCCTACGAACTATGGGCCGTGAGGAACTACTGTAATAGTGATATCAGTAAGGCCCGTGTCAGGCCCGCCGGCCCAGATGGTGGTGATAAGTTGAGGTCCGGGTTCTCTATTCTGGACTCTGCAGTGCGTGTGTAG 615 0.5024 MRPTFFNSNNKASMALSTRFLHLLFLLSLCFITTTVRSDDDCVYTVYIRTGSIIKGGTDSIIGLKLYDQYGYGIYIKNLEAWGGLMDPGYNYYERGNLDIFSGRGPCLNGPVCAVNLTSDGSGDHHGWYCNYVEVTTTGAHIPCAQQQFTIEQWIATDTSPYELWAVRNYCNSDISKARVRPAGPDGGDKLRSGFSILDSAVRV* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1173 204 PANTHER PLAT-PLANT-STRESS PROTEIN 14 202 - -
Ahy20g1173 204 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 43 160 IPR036392 GO:0005515
Ahy20g1173 204 Pfam PLAT/LH2 domain 44 162 IPR001024 GO:0005515
Ahy20g1173 204 Gene3D PLAT/LH2 domain 32 161 - -
Ahy20g1173 204 CDD PLAT_plant_stress 42 169 - -
Ahy20g1173 204 PANTHER - 14 202 - -
Ahy20g1173 204 ProSiteProfiles PLAT domain profile. 42 169 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1173 Ahy-Chr20 20579749 20580752 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1173 - - adu:107469134 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1173 20 20579749 20580752 Ahy10g0865 10 12568833 12569881 hybridization