Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1170 ATGGATTCGGGCAACAGTACCGCTGGGAGCATGCAGTCCTCAAGTAGTGGTGCTCCTGCTGATGAAGATTCGTACGACTCACACTCACACTCACACTCACGCGCCCAACAACAACCCCATCATCATCATATTCCAAATCAGTTATCAACAACAACCACCACCCTTCACCACACCCACGCCCCTATCTTTGATCCTTTGTTATCATCATCATCATCAACAACTTCAACAACCTTCTTGGATCCATCATCATCTTCAATTCAAAGATCAAATCCAACAATAGTAAACAACCTCGACATGCCGTGGTACATCACACCGAGATCCGGACTCGACCAACCGGATCTTTCCACCGTCATGCCGCAATTCGCTGTTCCACCACCACCGCCGCCGCCGCAGCTACCACCGTTGCTGCAGCAACAACAACAAGAAGAAGCGCGCAGCAACGCAAACAGTAACAGCACGGTGGTTCGGAACCCGAAGAAGAGGTCAAGGGCTTCACGGCGAGCACCAACGACGGTTTTAACAACGGACACCACGAATTTCCGAGCTATGGTTCAAGAATTCACTGGTATTCCAGCACAGCCCTTCACTTCTTCTTCTTCTTCTCCTTTTCCAAGAACAAGGTTGGATCTCTTTGTTGGTGGCGGTTCTTCTTCTTCTGCTGCTGCTGCTGCTGCTTCTGGTGCTGGTCCTCCTTATCTTCTTCGTCCATTTGCGCAGAAAGTTCCTCTACCGTCGTCGTTTCCTCAAACCAATTATAATTCTTCACCTTCTTCTTCGTTATCTTTTCCACCTTCTTCTTCCATGGTGATGAACAACATATTATTTGTTCCTAATTCTAACAATCCAATTAATAACAGCTACCAACAACTTTCTTCTTCTTCTTCTTCGCCCCTTGGGCTTTTGAAACAGCATCAGCATCTTAATAATGTGAACTTGAACAACATGCAAAACAACAACAACAACCCTGCATCGATTCTGAGCTTTCAATCGATTCTTCAAGCACAACAAATTAGGTACCCTTCTCCTTCTCCTTCTCCTTCAACTTCTCCCCTTGTTGCATCGAAGGATCAAGAAACCTGCTTGGAGATTCCTCATCATCATAATCAGAGTAATAATAGTGGCACTGTTGACTCACATCTCAGAATGGGTGTGTTGGAGGAACAACTAGGATTCACTCATGCGCATGTTAGCACCACCACGAACATCAGCAATGGAGGAGTGTTAGAGAAGGGAAGAACCGAAGGTATGGTGGAGTCATGGATCAATTGTTCTTCTGATTAA 1281 0.4598 MDSGNSTAGSMQSSSSGAPADEDSYDSHSHSHSRAQQQPHHHHIPNQLSTTTTTLHHTHAPIFDPLLSSSSSTTSTTFLDPSSSSIQRSNPTIVNNLDMPWYITPRSGLDQPDLSTVMPQFAVPPPPPPPQLPPLLQQQQQEEARSNANSNSTVVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAQPFTSSSSSPFPRTRLDLFVGGGSSSSAAAAAASGAGPPYLLRPFAQKVPLPSSFPQTNYNSSPSSSLSFPPSSSMVMNNILFVPNSNNPINNSYQQLSSSSSSPLGLLKQHQHLNNVNLNNMQNNNNNPASILSFQSILQAQQIRYPSPSPSPSTSPLVASKDQETCLEIPHHHNQSNNSGTVDSHLRMGVLEEQLGFTHAHVSTTTNISNGGVLEKGRTEGMVESWINCSSD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1170 426 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 423 - -
Ahy20g1170 426 MobiDBLite consensus disorder prediction 66 92 - -
Ahy20g1170 426 MobiDBLite consensus disorder prediction 110 170 - -
Ahy20g1170 426 MobiDBLite consensus disorder prediction 136 158 - -
Ahy20g1170 426 Pfam VQ motif 167 194 IPR008889 -
Ahy20g1170 426 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 423 IPR039609 -
Ahy20g1170 426 MobiDBLite consensus disorder prediction 1 47 - -
Ahy20g1170 426 MobiDBLite consensus disorder prediction 1 22 - -
Ahy20g1170 426 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1170 Ahy-Chr20 20219913 20221193 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1170 - - aip:107620295 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1170 20 20219913 20221193 Ahy10g0863 10 12462474 12463724 hybridization