Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1157 ATGGGAAAGAAGCAATCTTTGCGTAGCAAAGCTACCCAGATTGTATCTGTTATCCTGAATCCAATATCTGACTCTGACACTCTCAAACACCCTCCTCCAACACCTTCTGATGAGGTAGGGGGATTAGGAGGAACAACAAGTGAACCAGAGAAACCTGAAGAGGGTAGCAATGATTTAGTTGATGGCCCTGATACCTCATCTTTCAGTGCATTTCTATATTCTTTCTTGTCTTCATCAGATGCTGGAGGAGATAATGCAAAGGTACATGGACAGAGTGATGGTAAAGGTGCTTCAGGTGATGATAATAACCCTTTACCCGATTCATCGTTGAAGGAGAATAATGGTGGAAAGAAAAGCTTGTTCTCTAGGAGTAAGCAATCACTTGGTAGAGTTATTCGCCAAGCCGCTAGGATCGGTGGATTTCGCCATCAGGGGCGAAAGGATAATAATTCCGAAATGAATTCTGATTGTCTAAATGGTTCTGGATTGAATGGTGTTGAGATGAATCATCTTTCAACTGTGAAAGGGAAAGAATCAGAGTCTGTGTCTTTGGTTGACATGCCAGAAATTTCTGAGCCGTCGATGCTCCTTTCAGACGCGATGAGAAGTACTCTCTATGCTTCTCTTCCTGCTCTTGTTCATGGAAGGAAGTGGCTGTTGCTGTACAGCACTTGGAGGAACGGTATATCACTTTCAACCCTTTATCGAAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTCGGAGACCGAAGAGGAGCAGTGTTTGGAAGCTTAGTTGAAGCACCTCTTAGACCATCCAACAAGAAATACCAGGGAACAAACAGTACATTTGTTTTCACAAGTATTTCTGGCCATCCTGTTATATATCGTCCAACAGGGTTAAACCGCTATTTCACACTATGCAACACTGAGTTCTTAGCAATTGGAGGGGGAAGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAATGGCTCAAGCTCGGTCTCGGAAACCTACGGAAATCCTTGCCTTGCGAATTCTCAAGATTTCGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTGTATGCTTCAAAATATGATGAAGTACTTGCATTTAGCAGAACAGAGGCACCTGGCATCTGTCGATGGTAA 1140 0.4333 MGKKQSLRSKATQIVSVILNPISDSDTLKHPPPTPSDEVGGLGGTTSEPEKPEEGSNDLVDGPDTSSFSAFLYSFLSSSDAGGDNAKVHGQSDGKGASGDDNNPLPDSSLKENNGGKKSLFSRSKQSLGRVIRQAARIGGFRHQGRKDNNSEMNSDCLNGSGLNGVEMNHLSTVKGKESESVSLVDMPEISEPSMLLSDAMRSTLYASLPALVHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDRRGAVFGSLVEAPLRPSNKKYQGTNSTFVFTSISGHPVIYRPTGLNRYFTLCNTEFLAIGGGSHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVYASKYDEVLAFSRTEAPGICRW* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1157 379 SMART 109ultra 194 357 IPR006571 -
Ahy20g1157 379 Pfam TLD 220 356 IPR006571 -
Ahy20g1157 379 MobiDBLite consensus disorder prediction 84 128 - -
Ahy20g1157 379 ProSiteProfiles TLDc domain profile. 195 357 IPR006571 -
Ahy20g1157 379 MobiDBLite consensus disorder prediction 96 128 - -
Ahy20g1157 379 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 373 - -
Ahy20g1157 379 MobiDBLite consensus disorder prediction 18 64 - -
Ahy20g1157 379 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1157 Ahy-Chr20 19729531 19732891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1157 217 360 EF-hand Containing Proteins AT5G06260 30.519 1.43e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1157 - - aip:107622578 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1157 20 19729531 19732891 Ahy10g0853 10 12283727 12287052 hybridization