Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1111 ATGGGACTTGTTTTTACTAAATGGGCATGCGCATTCTTACTCTCTTGTTGGCTCATAACCTACAAGGTACATTCAGTGGAGGGGTTACATAGGGGTTCTAAAGTGAGAGGAGTGAACTTGGGAGGGTGGTTGGTCATTGAAGGTTGGATCAAACCTTCATTGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGAACAGAGGTGCAATTTAAGTCAGTGACATTGCAGAAGTATGTATCTGCAGATAATGGGGGAGGAATGAATGTGACTGTTGATAGGGATGTTGCATCTTCATGGGAAACCTTCAGGTTATGGAGAGTCTCTCCATCTGAATTTCAATTTCGTACCTCAAAAGGTCAGTTTCTTACATGTGATGGCGATGGCTGCACTGTCTCGGCAACAGCAAACTCTCCTTCAACATCAGAGACATACGAAATAGAGCGGAATGGGAACAGTAGAATTCATATGAAGACAAAGAATGGGGCCTATCTGCAGGCTACAACAGATGGTCAGCTTACAGCAGATTACCCGGGTTCACCAGGATGGGATGATAATGCTGCCACATTTGACATGACAATTTTGTCGAATAATTTACATGGAGATTACCAGCTAGCAAATGGATATGGACATGATCGTGCGAAAGATGTTCTTAAGAGACATAGAAATACCTTTATCACCATTGAGGATTTCAAATTTCTATATAAACACGGAATAAACACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTTCGATCCTGATCCTCCGAGTCCTTTTATTGGAGGAAGTCTTGATGCTCTAGATAATGCATTTTTATGGGCACAAGAATATGATATAAAATGCATAATTGATCTTCATGCTGCTCCTGGTTCCCAAAATGGGATGGAACATAGTGCAAGCAGAGATGGATTCACCGGCTGGCCTGATTCTCCAGATAACATTCAACAGTCGTTGAATGTTATTGAATTTTTAGTTTCTAGATATGCAAGGAATCCTGCTTTGCTGGGAATTGAGCTTCTAAATGAACCGTCTGCCGGAACAGTTCCATTAGATACTTTAGTTTCTTATTACAAACAGGGCTACCAAATTGTTAGAAAACACTCTTCAACAGCTTATGTAATAATGTGCCAAAGAATTGGCATGGCAGATCCTATGGAACTTTACCAAGCCAACATAGGATCTCATAACACAGTTTTGGATTTGCATTACTACAACCTCTTCGACGCGTATTTTGTTAATATGAGCGTCGGCGATAACATACAGTACATATACAATAGCCGGGAAGGTCAACTCAAGGCCTTGAATAGTTCAAATAGCCCACTTGTTTTTATTGGAGAGTGGGTGAATGAGTGGAATGTGACGAGCGGATCGCAAAAGGATTATCAAGATTTCGGAAGGGCACAGTTAGAAGTTTACAATGCAGCTTCCTTTGGATGGTGTTACTGGACAATAAAAAATGACAGACAGCACTGGGATTTTGAGTGGAACGTTAGGAGCAACTATCTTCAGTTAGGCAAATCACCCAGCAAACAGAGATTTAACATTTTTGGATTGATAGGATTGGCATTCACCTGCTTTTGTCTCCCTTTTTTGTGA 1599 0.4121 MGLVFTKWACAFLLSCWLITYKVHSVEGLHRGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQFKSVTLQKYVSADNGGGMNVTVDRDVASSWETFRLWRVSPSEFQFRTSKGQFLTCDGDGCTVSATANSPSTSETYEIERNGNSRIHMKTKNGAYLQATTDGQLTADYPGSPGWDDNAATFDMTILSNNLHGDYQLANGYGHDRAKDVLKRHRNTFITIEDFKFLYKHGINTVRIPVGWWIAFDPDPPSPFIGGSLDALDNAFLWAQEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPDSPDNIQQSLNVIEFLVSRYARNPALLGIELLNEPSAGTVPLDTLVSYYKQGYQIVRKHSSTAYVIMCQRIGMADPMELYQANIGSHNTVLDLHYYNLFDAYFVNMSVGDNIQYIYNSREGQLKALNSSNSPLVFIGEWVNEWNVTSGSQKDYQDFGRAQLEVYNAASFGWCYWTIKNDRQHWDFEWNVRSNYLQLGKSPSKQRFNIFGLIGLAFTCFCLPFL* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1111 532 Gene3D Glycosidases 188 514 - -
Ahy20g1111 532 Pfam Fascin domain 87 176 IPR022768 GO:0030674|GO:0051015
Ahy20g1111 532 PANTHER - 12 511 - -
Ahy20g1111 532 SUPERFAMILY (Trans)glycosidases 34 504 IPR017853 -
Ahy20g1111 532 PANTHER FASCIN 12 511 IPR010431 GO:0007015|GO:0051015
Ahy20g1111 532 Pfam Cellulase (glycosyl hydrolase family 5) 226 488 IPR001547 GO:0004553|GO:0071704
Ahy20g1111 532 ProSitePatterns Glycosyl hydrolases family 5 signature. 336 345 IPR018087 GO:0004553|GO:0005975
Ahy20g1111 532 SUPERFAMILY Actin-crosslinking proteins 69 180 IPR008999 -
Ahy20g1111 532 Gene3D - 47 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1111 Ahy-Chr20 17978934 17983953 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1111 - - gmx:100809472 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1111 20 17978934 17983953 Ahy10g0813 10 10896718 10904050 hybridization