Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1106 ATGGCCTTCTCAATAGGTGCTACTACTACGAGTAGCAGAAGCATGAACAATGGCGTGACCACAGTGGATTGCCACAAACAAGTTCGATCATGGAGGCTCCTACGTTACCTGGTGGCACTCCTTATCCCAACATGTAACTGCATTGAACAAAAAGAAGAAAAGTTTGAGCACAAGAAAATCATGAGCAACATCACAGGCACAATTTTCGGTTACCGGAAGGGGAAGGTAAGTTTCTGCATCCAATCGAAGTCGAACTCATCGGAACCGATTCTCCTTCTTGAATTGGCGGTTCCAACGACGATCTTGGCGAAGGAAATGCGAGGAGGAACGCTGAGAATAGTTCTTGAGAGTAGTTGCAGTTATAACAAGAATCTGTTTTCGACGCCGCTTTGGACGATGTATTGCAATGGAAGGAAAGTTGGTTACGCCGTTAATCGAAGACCGTTGAATTCTGATATGGAAGCGTTAAGGTTGATGCGTTCTGTTTCAGTTGGAACTGGCGTTATAAATAATGAACAAGATAATGAGCTTATGTATCTAAGAGCATCGTTTCAAAGGGTTCGTGGAACTTCAAATTCTGAATCTTTTCATTTGATTGATCCAGAGGGGTGCATTGGACAGGAGCTAAGTATCTTCTTTTTTCGCTCACCCACATGA 657 0.4338 MAFSIGATTTSSRSMNNGVTTVDCHKQVRSWRLLRYLVALLIPTCNCIEQKEEKFEHKKIMSNITGTIFGYRKGKVSFCIQSKSNSSEPILLLELAVPTTILAKEMRGGTLRIVLESSCSYNKNLFSTPLWTMYCNGRKVGYAVNRRPLNSDMEALRLMRSVSVGTGVINNEQDNELMYLRASFQRVRGTSNSESFHLIDPEGCIGQELSIFFFRSPT* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1106 218 PANTHER - 15 50 - -
Ahy20g1106 218 Pfam Protein of unknown function, DUF617 64 215 IPR006460 GO:0010274
Ahy20g1106 218 PANTHER DUF617 FAMILY PROTEIN 15 50 - -
Ahy20g1106 218 PANTHER - 62 216 - -
Ahy20g1106 218 PANTHER DUF617 FAMILY PROTEIN 62 216 - -
Ahy20g1106 218 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 64 216 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1106 Ahy-Chr20 17908304 17908966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1106 - - gmx:100805400 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1106 20 17908304 17908966 Ahy10g0812 10 10870431 10871259 hybridization