Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1097 ATGGGGTCTGTTGCTCGAAGGTGCGGCAGTTTTGCTTGTAGAAAACCAAGTGAAATTATGAGGCTTGTTGTGACAACTTTTATCGGTTTAGTTTTCGGCTTTTTTATAGGAGTATCATTTCCGACCTTGTCATTAACAAAGTTGAATCTCCCATCTGGCTTGCTTCCGTCCATTGATCTCGCTTACCTTGAAGGCAAATATACCAATCGCTGGTCTTTAATGAAGAATAATAACAATACTAAAAGTACCTCACCACTGAAGCAACTTAAACATGAAGCCAAGATTTGGGTTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCTGCCATTGTTGAAGCAGAATCAGACTATTATTTGCGTAGACTATGGGGCAAGCCTAGTGAGGATATAACATTCAAACCAAAGTACCTTGTAACCTTCACCGTAGGTGCTGGGCAGAAAAGGAATATTGACGCAGCTGTGAAGAAGTTTTCAGGGAACTTCACCATCCTTCTATTTCATTATGATGGCCGGACAACTGAATGGGACGAGTTTGAATGGTCAAAGCGTGCTATTCATGTGAGTGCTCGCAAACAGACCAAATGGTGGTATTCCAAGCGATTTTTGCATCCTGATATTGTAGCCCCATATGACTATATATTTATATGGGACGAGGACCTTGGGCTTGAACACTTCAACGCAGAGGAGTACTTAAGACTGGTGAAGAAGCATGGGTTAGAGATTTCACAGCCTGGTTTGGAACCTAATAAAGGTCTGACATGGCAGATGACGAAAAGAAGAGTTAGACAAGAAGTTCACAAAGTAACCCAGGAGAAAGAAGGATGGTGTTCTGACCCTCATCTGCCACCTTGTGCGGCGTTTGTTGAGATTATGGCTCCGGTGTTCTCGCGAGATGCATGGCGCTGTGTGTGGCATATGATTCAGAATGACTTGGTCCATGGGTGGGGGCTTGACTTTGCTCTTAGAAAATGTGTTGAGCCTGCGCATGAGAAGATTGGAGTTGTCGATGCTCAGTGGATTGTTCACCAAGGTGTTCCCTCGCTAGGGAATCAGGGTGAAAAAGAACCTGGGAAAGCGCCATGGCAGGGGGTGAGGGATAGGTGTCAAAAGGAGTGGCAAATGTTTCAGATTCGGATGGCCGATTCAGAAAAAGAGTATTACCAGTCTATGGGATATGATGTGTCTAACTACAGTGTTCCTATGTTTAGTTAG 1215 0.4412 MGSVARRCGSFACRKPSEIMRLVVTTFIGLVFGFFIGVSFPTLSLTKLNLPSGLLPSIDLAYLEGKYTNRWSLMKNNNNTKSTSPLKQLKHEAKIWVPSNPRGAERLPPAIVEAESDYYLRRLWGKPSEDITFKPKYLVTFTVGAGQKRNIDAAVKKFSGNFTILLFHYDGRTTEWDEFEWSKRAIHVSARKQTKWWYSKRFLHPDIVAPYDYIFIWDEDLGLEHFNAEEYLRLVKKHGLEISQPGLEPNKGLTWQMTKRRVRQEVHKVTQEKEGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGEKEPGKAPWQGVRDRCQKEWQMFQIRMADSEKEYYQSMGYDVSNYSVPMFS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1097 404 PANTHER PROTEIN, PUTATIVE (DUF707)-RELATED 12 399 - -
Ahy20g1097 404 Pfam Protein of unknown function (DUF707) 99 385 IPR007877 -
Ahy20g1097 404 PANTHER OS06G0731900 PROTEIN 12 399 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1097 Ahy-Chr20 17570006 17578761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1097 - - gmx:100778486 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1097 20 17570006 17578761 Ahy10g0805 10 10588090 10596582 hybridization
Ahy13g4074 13 140198602 140203529 Ahy20g1097 20 17570006 17578761 PCT
Ahy3g3797 3 137350414 137355360 Ahy20g1097 20 17570006 17578761 PCT