Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1090 ATGGCGGAGCTGAGACACTCAGCCTCCTTCGGCCCTCGCGCCACCTCTTCTCCGATGAAGCGCGATGCCGATTCATCACCTCTCATCCCCTCCGCCACCGCGGACCACCATCACCACCACCTTCCCGACGACGACGAGGAACGCGACCGCCACTCCCTTAAGGACCGGTATCGTCCCCTACAGTATCTCTCTTCCTTCTTCGGCGATGACCCTAGGGTTCCCAATCCTCTCCATTCCCCAAGGATCTCATTCTTCTGCACCTTGCTTCTAATCCTCGTTGGCCTTCTCTCCCTCTTCTCAATCGTCAACAAATTGAATGCTCCTTACCTGTGTAAAAAGGATGGGATTACACTTCACTGCCCTCACGTGAAAGAATCGCCGTCTCTGTGGGAAAATCCTTTATCGTCCACGACGTCTTGGAAGCCTTGTGCTGAGCGCAGGGATGGTGTTATAGAAGAGCTTCCTCCTGAAAATGAAACAAATGGGTACATATTCATCCATGCTGAAGGTGGTCTAAACCAACAAAGAATTGCGATATGCAATGCCGTGGCTGTGGCCAAAATAATGAATGCCACACTTATTTTGCCTGTTTTGAAGCAAGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATAGATTACCTGAAATATGATGTTCGTATAGTCCGTGATATCCCAGAATGGTTTACTGATAAGACAGAGCTATTCAGTAGTATAAGGAGGACTGTAAAGAACATTCCAAAATATGCGCCTGCACAATTTTACATTGACAATGTTTTGCCTCGAGTCAAGGAGAAAAGGATTATGGCTCTAAAACCTTTTGTTGATAGGCTGGGATATGACAATGTTCCTCCAGAAATCAACAAGTTGAGATGTAGGGTTAATTATCATGCTCTGAAATTTCTTCCTGATATAGAGCAAATGGCTGATTTACTGGCATCAAGGATGAGAAACCGAACTGGTAGTTCAAATCCTTATATGGCTCTGCATCTTCGATTTGAGAAAGGAATGGTGGGCCTATCGTTCTGTGATTTTGTGGGGACAAGAGAAGAGAAAGCTAAAATGGCAGAATACAGGCAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACTTATGGCAATTGGCTCTACAGAAGCGAAAGGAGGGACGGTGTCCTCTAGAGCCTGGAGAAGTGGCCGTTATACTTCGTGCTATGGGCTATCCAAAGGAAACACAAATTTATGTCGCTTCTGGACAAGTTTATGGTGGACAGAATCGGATGGCTCCGCTGAGGAATATGTTCCCTAATCTGGTTACAAAGGAGGAGTTGGCAACTAAAGAGGAGTTGGATGGTTTTAGAAAGCATGTGACGAGCCTTGCAGCTCTTGACTTCCTGGTATGCCTGAAGTCAGATGTGTTTGTGATGACCCATGGAGGCAACTTTGCTAAGCTGATCATTGGCGCCCGTAGATACATGGGTCACCGTCTAAAATCAATCAAGCCTGACAAAGGATTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACTTTTGTTGAAGATGTGGTTGTTACTCATCAAACGCGGACAGGATTGCCGGAAGAAACTTTCCCCAACTATGACCTCTGGGAGAACCCCTTGACTCCTTGCATGTGCAAAGCCTGA 1680 0.4625 MAELRHSASFGPRATSSPMKRDADSSPLIPSATADHHHHHLPDDDEERDRHSLKDRYRPLQYLSSFFGDDPRVPNPLHSPRISFFCTLLLILVGLLSLFSIVNKLNAPYLCKKDGITLHCPHVKESPSLWENPLSSTTSWKPCAERRDGVIEELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRVKEKRIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAKMAEYRQKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCKA* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1090 559 MobiDBLite consensus disorder prediction 33 51 - -
Ahy20g1090 559 MobiDBLite consensus disorder prediction 1 51 - -
Ahy20g1090 559 PIRSF UCP009360 46 559 IPR024709 -
Ahy20g1090 559 CDD O-FucT_plant 163 498 IPR024709 -
Ahy20g1090 559 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 559 - -
Ahy20g1090 559 Gene3D - 305 502 - -
Ahy20g1090 559 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 559 - -
Ahy20g1090 559 Pfam GDP-fucose protein O-fucosyltransferase 163 495 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1090 Ahy-Chr20 17347993 17353194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g1090 129 558 Miscellaneous Gene Families AT1G22460 35.698 1.37e-93 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1090 - - gmx:100809112 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1090 20 17347993 17353194 Ahy10g0797 10 10425763 10430948 hybridization