Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1089 ATGACGGCAGAGATGGTTAGGGTTCGCGTAGTGTTTGAGGAGGGCCACATGCTGAGCAAGTCGAAGAAGAAAGAAGGACTGAAGCGCTGCTGGCTCCTCCTTAAACCCCAATACAAGACCATCTCCGATCTCTCCTCTCATCTCCAAAACGCGTTCAAGCTCCATCGCACTTGCCCTAACGGCATCACTCTCTATATGGATGGTTTTGTTTTACCACCTTTTGAGTCGACTAGTATTTTGAAGGATAAGGACATTATCTGTGTGAAAAGAAAAGGGAGCATGTTAATTGATAAGCCTGATACACCTATATCTGCACATAATGGGCATCAATCCATAGAGCTTGCAAAGCTTCTTGCAATTGAGGGGCCTCAAGATAAGGAGGCTGGAAGACATGAAACTGATTCGGAGGAGGATGGCAGCGGCCAATTTGGTGATACAATTTATGCAGAACCTGAAATAGATGGCAATGTAATCTCAAAGAAGAGAAAAGCATCAAAGAAGCTCAAGAGCCCGAGTCAGAAGAAGATGAAGTTGTCTTCGCCAGATAAGTTGACAGTCACTGAGGTTCATGAGGAGGAAAAAGAAAATGGAACCCCCACTCATAACAAATTGAGTCTTTCCAAGAAGGAGAATGACAAGTCATCTAATTTATCTAGTCAGAAAAAGAAGTCTAAAAACCTTAAATCTCATAAACAGAGTAATGACAAAAGTGAGCCTATGCATGATGAGAAAAGGTTACCTCAACCTCAAGGTGATGGTGGAAGTGGCACTAAGAAGACGCCTAGCAGAAGTGCTCGACGAAAGAAAGCTAAGAGAAAATGGCTAAGGGAACAACTAAAATCAGAGAAGGAGAAGCTGCATCAGAGTCCAGCAGTTGAGAAAGATGTTCAGAAATTGCCTGCCAAAAATAATATCCGCAGTGTCGCTAATGCACCACAATCTGATGAAGAAAGTGAAGCAGAGGATGACATTGTTCCTGTTGAAATCAGACCAGGGCACATTCGCTTTCAGTCACTTAAGAAAGATCAGGAAGCACCACAGAATCAGATCCCAGTGGAAACAAGTCAGTGGAATGGAATTACCAGCAAGAAGAAGGGTCAGAAATGGGGTAAAGAGAGCACCTGGCCTCATAAACAGGATGCATATGCACATTCCAGCCAAGATTATCATACTGTTCAGAATGTTGAAAAGAAACATGCGTCCAAGGCTATCGATTTTGACAAGCTTACACCATATACAAGCTTGCCCAAGGAAGGTGATGTCATTGCATATCGATTAATTGAATTGTCATCATCTTGGACACCCGAGCTTTCTTCCTTCAGAGTTGGGCGCATAACAAAGTACAATGCTAAATCAAACAGAGTTTCTCTGGAACCAGTTTCAGAATATCCATTTGAGTTTAAGAAGAAAATAGATGACGATGCATCTTCTGTACAGTTTGATCCATCTCCTTATGGAGAAGATGGTTCTCTAGAGATAGATTATTTATCACTTGCTGAAGTTCGTATGGTTAGTCATGGCAACAACTTGAATTCATCAGCCATAGCTGTTTCTAATAATGATTGGGATCATCTTACAAAACCATCTAATGGTAGCATTAACAAAAAATGTTCGGGTGATCAAACTGCTGTGGGAAGCTCTGAACCGGTGAACGGAGGTCATACCTCTGCTAAAGAAAATGGAGCAGTAAATGTGTGGGATGAAATTAACGAGGCATTAACAGCAAAGAAGACGAAACTGTCACAGGCAAATTGCTGGCGCAAAGAAGAAAGTTCAAGCTCACAGTCATGGTCCCAAAGAGCCTTGAGATGCAGTGCACTAGGTCCAACAATGGCGCTGCTAAGATCCCAGAATGGACTTAATTAA 1866 0.4228 MTAEMVRVRVVFEEGHMLSKSKKKEGLKRCWLLLKPQYKTISDLSSHLQNAFKLHRTCPNGITLYMDGFVLPPFESTSILKDKDIICVKRKGSMLIDKPDTPISAHNGHQSIELAKLLAIEGPQDKEAGRHETDSEEDGSGQFGDTIYAEPEIDGNVISKKRKASKKLKSPSQKKMKLSSPDKLTVTEVHEEEKENGTPTHNKLSLSKKENDKSSNLSSQKKKSKNLKSHKQSNDKSEPMHDEKRLPQPQGDGGSGTKKTPSRSARRKKAKRKWLREQLKSEKEKLHQSPAVEKDVQKLPAKNNIRSVANAPQSDEESEAEDDIVPVEIRPGHIRFQSLKKDQEAPQNQIPVETSQWNGITSKKKGQKWGKESTWPHKQDAYAHSSQDYHTVQNVEKKHASKAIDFDKLTPYTSLPKEGDVIAYRLIELSSSWTPELSSFRVGRITKYNAKSNRVSLEPVSEYPFEFKKKIDDDASSVQFDPSPYGEDGSLEIDYLSLAEVRMVSHGNNLNSSAIAVSNNDWDHLTKPSNGSINKKCSGDQTAVGSSEPVNGGHTSAKENGAVNVWDEINEALTAKKTKLSQANCWRKEESSSSQSWSQRALRCSALGPTMALLRSQNGLN* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1089 621 MobiDBLite consensus disorder prediction 275 292 - -
Ahy20g1089 621 MobiDBLite consensus disorder prediction 341 363 - -
Ahy20g1089 621 MobiDBLite consensus disorder prediction 230 248 - -
Ahy20g1089 621 MobiDBLite consensus disorder prediction 125 374 - -
Ahy20g1089 621 Pfam Coilin N-terminus 6 236 IPR031722 -
Ahy20g1089 621 MobiDBLite consensus disorder prediction 184 219 - -
Ahy20g1089 621 PANTHER COILIN P80 1 618 IPR024822 -
Ahy20g1089 621 Coils Coil 265 285 - -
Ahy20g1089 621 MobiDBLite consensus disorder prediction 531 558 - -
Ahy20g1089 621 MobiDBLite consensus disorder prediction 324 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1089 Ahy-Chr20 17244419 17249838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1089 K13150 - gmx:100776892 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1089 20 17244419 17249838 Ahy10g0796 10 10343777 10349208 hybridization