Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1074 ATGAAGCTCCAACAATTTCCCGCTAAGAATGTAGCAGTCACCATGTTAAACGGGATTCAAAATTCGAACACTCTTCAGGTGCTTTCAAAACCTAGATTTAGAAATGAGGAATTTATGGAAAAGATACTCAACAGAAGATGGACACTGCCAAGCCCTGAAACAAAGATTCATCAAGTTATAATACCTAGACATGGATCAGATGGTTGTAATTTCCTATTGAACACCGTTCCTGATTTAGGTCATGGCGCTAGGGATATGAAAAATAAAGGGAAATGTTTCTATGTGGTGCGTGACGATTTGTTGCACTCACTAATTAATGGCAACAAAGCAAGAAAGTTGGATGGGTTGATTCCCCTTATTGAAGACCATTCTGTGACTGATGTGGTTACATGTGGTGGTTGTCAAAGTGCTCATACAGCTGCTATTGCGGTTCTATGTGCTGAGAGAGGAATTGCATCACACCTGCTTCTGCGAGGAGAGCAGCCTGAAATCTTAACTGGCTATAACTTGATGTCTACATTATATGGAAATGTCACATATGTTCCGAGAAATATTTATGCCGACAGAGAAAACATGCTTAAGGACTATGCTAAGTCATTGGCTGGTAACAGTGGTTCTGTCATTTCGTTTGGCAATATCACTCAAAATTCTTCAACAACAGAATTTTCTACTGCAAATTTGATGGAATTTGATGTAAGTAGAAGTGACAGAAACCTTCAACGGAAATTTTTAATTGTCAATGAAGGTGCAGGTGATTCTGTAGCTCTACTAGGTATGATTCGGTTAGTGCAATACTTATCACAGAGTCATTTACTTGGAAAAGACAGGGCCTTGAAATTTGTTATAGATGCTGGAACTGGCACAACAGCTGTTGGTTTAGGACTTGCAGCCCTATGCTTAGGCCTTCCATGGGAGGTACATGCAGTCATGCTGGCTGACAAAATTGATGGATACAAACAACAGGAGGATCGTTTGATTTCTGAATTCCAGAACCATTTTAATGTTCAGTTTAGTGACCACAACATAAATGAAGATGGTGGGATTGTGTATTGGGTGGAACGTGGTCGTCCAAGAAGATTTGGTAATGTTTTGGAAGGTGAGGTGGAAGCATGCCAACAAATTGCTCAGCAGACTGGGATTTTGGTGGATCCTGTTTACACATTGGCCGCTTGGGAAACAGCGATGCTCCTTTCTAGCAAAGAAGATGATAGAGAATCAGAAGTGGTGATGCTTCATACTGGTGGCACGTTGGGCATGTTTGGGTTGGCGCAAAGGTACAGGAATTACTTTGGCATGCTCCAGAAAGGACCCAATTGTTCTTAA 1323 0.4112 MKLQQFPAKNVAVTMLNGIQNSNTLQVLSKPRFRNEEFMEKILNRRWTLPSPETKIHQVIIPRHGSDGCNFLLNTVPDLGHGARDMKNKGKCFYVVRDDLLHSLINGNKARKLDGLIPLIEDHSVTDVVTCGGCQSAHTAAIAVLCAERGIASHLLLRGEQPEILTGYNLMSTLYGNVTYVPRNIYADRENMLKDYAKSLAGNSGSVISFGNITQNSSTTEFSTANLMEFDVSRSDRNLQRKFLIVNEGAGDSVALLGMIRLVQYLSQSHLLGKDRALKFVIDAGTGTTAVGLGLAALCLGLPWEVHAVMLADKIDGYKQQEDRLISEFQNHFNVQFSDHNINEDGGIVYWVERGRPRRFGNVLEGEVEACQQIAQQTGILVDPVYTLAAWETAMLLSSKEDDRESEVVMLHTGGTLGMFGLAQRYRNYFGMLQKGPNCS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1074 440 Gene3D - 108 210 IPR036052 -
Ahy20g1074 440 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 90 427 IPR036052 -
Ahy20g1074 440 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 18 435 IPR027278 -
Ahy20g1074 440 Gene3D - 224 429 IPR036052 -
Ahy20g1074 440 PANTHER D-CYSTEINE DESULFHYDRASE 2, MITOCHONDRIAL 18 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1074 Ahy-Chr20 16690267 16694669 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1074 K05396 - gmx:100801680 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1074 20 16690267 16694669 Ahy10g0772 10 9633571 9638078 hybridization