Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1073 ATGCAAAGTCGTTGTTCCTCACTCAGTCACTTGTGCTTGGGCTCCAGAAAACAAGCAAGGAACCAAGTACCATCTCACCCAGCCGCCACTCCTTTCCATATGTCTTCTCCCGGCCACGGCGCCTCCTCCGCCGTGCAGGTGGCGGAGCAATTCTTATCCGCTGGTCGGAGCTCCGAGAAGCTGAGCCTTTCAACACTCCAATCGAAGATGAAGTGTGACCCGGAAGGCTACGTATCGCAGCTCCTTCGACTCTGCGACCAGTTCAATTCCTCCCTCGTGCTCTTCGAGCAACAAGCCGCCATGAACTTCGCCTCCATCACCGGCATCGGTGGCGACCCCACCGTTGCCAAAGACCTCGGCGATAAGGCAATGTTCCTCGCACACGTCACCCCTTTCTACCCCAAACACCTCAAAGATTTCCCCCAAAAACTCGCCAGTTTGATCCGTTGCGCCTCCCGCAATCTCCCGTCGGGGCTCCGCTGCCGCCTCGCTCAAGCTCTAATTCTCCTCGTTAATCGGAAGATTGTTGATATTGGCGAAACTCTGTCGTTGTTCATGGAGCTTCAAACCTTAGGTGACAGGACATTGAAGAAGCTGGCATTTGATCACGTCATTCACAGTATTAAGCGCATGAACCAGAAGCATAAGAACCAAGCGAAGAACCGGGCTCTGCAAAATGTCTTGTTTTCAATGTTGCAGGAAGAGGATGAAGTGCGAGCTAAGAGAGCGCTCGTGACACTGTGTGAACTTCACAGAAGAAAAGACTGGTTTGACGAGAGAACAGCTAATGCAATTTGCGGTGCTTGTTTCCATCCAGCACCAAGGATCATGAAAGCGGCTTTATCGTTTCTACTAGATTATGAGAAGATTGAAAATGATTCAGACAGTGACAATTCAGACAGCGAAGATGAAACCAAGGAGTCTCCTCAAGTCATCCTTAGTAAGGAGACAATTTATAAGGCACACCACCAAGGAACAGCAGCTAGCAAAAAGAAAAAGAAAGCCAAACTAGAACGTGCCATGCGCAGCATCAAAAGGAAGCAACGTTTGTCAACTGAGAGGAACAATAACAGTTATTATTCACCACTTAACCATCTGCAAGATGCACAGGGTTTCGCTGAGAAGCTGTTGTCACGTTTACACAAATGTAATGAAAAATTTGAGGTTAAGCTGATGTTGATGAAATTGATTGCTCGAACTGTTGGGCTTCACCGGTTAATTTTGTTAGACTTCTATCGATTTCTTCAGAAATATATTCAGCCACGTCAACAAGATATTACGAATTTGCTTGCTGCAGTGGTTCAGGCTTGCCATGACATGGTTCCTCCTAATGAAGTTGAGCCCTTGTTCTATCAAATAGTAAATGAGTTTATACATGATCGCTCTCGTCCTGAGGCTATGACTGTTGGACTAAATGCAGTCCGGGAAATATGTATGCGGATGCCATTGTTAATGAATGAAGACTTATTACGAGACCTTGCTCTGCATAAGAAATCACATGAGAAGGGAGTTTCAATAGCAGCTCGATCTCTGATTGGCTTATTCAGGGAGGTTAACCCTTTATTGTTAGTTAAGAAGGATCGTGGCCGGCCTATGGACGCCAAGGCAAGACCAAAATCATATGGAGAAGTTAGTGCTGCAACTGATGTTCCCGGTGCTGAGTTCTTGCCCATTGTACACAATGAGGATGATCAGGAGGGTAGTGATTCCGATGATTCTGTAGGCAGTGGCTTTGACAATGACCAGGAAAATGATCTGATGACTATCAATGATGATGATGAGATAAGTTCTGATACCAAGACTGGTGAGAGTGATGAGGAGGATGATCTTGAAGATATGGAGGATGATCTTGAAGATATGGAGGATGACCTTGAAGACAGTGAACAGGATGACGAAGAGGATGGTGAGGTTTCCGAACAGGAAGATGATGATGTGCACACTTCTTGTGATGATGAAAGTGTAGGTGCAAATAGTAGAAAGAAAGACTCAGCAAAGAAAAGAAAGATTGCTGATTTTGATGATCAGCTTTTAGCTGCTGATACAAGTCTCCGGGCCTTGAAGAAATTGGCAGGGACAACAATGGGGCATGCACCCCTTCCAGAATCTACAGATGGTATTCTATCCAATGAGGACTTCAAGAGGATCAAGGAACTAAAGGAAAAACATGAAGCAAGAAACACATTTGCTCAGCATGGGCTAGCACGTTCGGCAATAATTAAGGTTCCAGATTCTGATAGACTAAGTTTGAAGCGAGTAGATGGCGCGACGCTTGAAGTTCATGTGAAGAAAAGGCAAAGCAAGGAAGAAAAGTTGGCATTGATTAAAGCAGGAAGAGAGGATAGAGGAACATACCATTCTAAAACAGCTGTAAAGCAGAAAAAGACGGGTGGACTAAGCAACCGTCAGAAGGAACACAAGAAGAAAATGCCAGTGGCTGCAAAGAGAAGCAAGATCGCAAAATCTCGTGTAGAGAAGAAGAAAAAGAATCAGCGAGCAGGGAAACAGTTCCGAGGAAGGAAAGCATGGAAATGA 2532 0.455 MQSRCSSLSHLCLGSRKQARNQVPSHPAATPFHMSSPGHGASSAVQVAEQFLSAGRSSEKLSLSTLQSKMKCDPEGYVSQLLRLCDQFNSSLVLFEQQAAMNFASITGIGGDPTVAKDLGDKAMFLAHVTPFYPKHLKDFPQKLASLIRCASRNLPSGLRCRLAQALILLVNRKIVDIGETLSLFMELQTLGDRTLKKLAFDHVIHSIKRMNQKHKNQAKNRALQNVLFSMLQEEDEVRAKRALVTLCELHRRKDWFDERTANAICGACFHPAPRIMKAALSFLLDYEKIENDSDSDNSDSEDETKESPQVILSKETIYKAHHQGTAASKKKKKAKLERAMRSIKRKQRLSTERNNNSYYSPLNHLQDAQGFAEKLLSRLHKCNEKFEVKLMLMKLIARTVGLHRLILLDFYRFLQKYIQPRQQDITNLLAAVVQACHDMVPPNEVEPLFYQIVNEFIHDRSRPEAMTVGLNAVREICMRMPLLMNEDLLRDLALHKKSHEKGVSIAARSLIGLFREVNPLLLVKKDRGRPMDAKARPKSYGEVSAATDVPGAEFLPIVHNEDDQEGSDSDDSVGSGFDNDQENDLMTINDDDEISSDTKTGESDEEDDLEDMEDDLEDMEDDLEDSEQDDEEDGEVSEQEDDDVHTSCDDESVGANSRKKDSAKKRKIADFDDQLLAADTSLRALKKLAGTTMGHAPLPESTDGILSNEDFKRIKELKEKHEARNTFAQHGLARSAIIKVPDSDRLSLKRVDGATLEVHVKKRQSKEEKLALIKAGREDRGTYHSKTAVKQKKTGGLSNRQKEHKKKMPVAAKRSKIAKSRVEKKKKNQRAGKQFRGRKAWK* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1073 843 Coils Coil 603 630 - -
Ahy20g1073 843 MobiDBLite consensus disorder prediction 19 40 - -
Ahy20g1073 843 PANTHER PROTEIN SDA1 HOMOLOG 57 843 - -
Ahy20g1073 843 Pfam NUC130/3NT domain 125 176 IPR012977 -
Ahy20g1073 843 Coils Coil 327 350 - -
Ahy20g1073 843 Pfam SDA1 485 840 IPR007949 -
Ahy20g1073 843 MobiDBLite consensus disorder prediction 585 648 - -
Ahy20g1073 843 MobiDBLite consensus disorder prediction 807 843 - -
Ahy20g1073 843 MobiDBLite consensus disorder prediction 562 667 - -
Ahy20g1073 843 SUPERFAMILY ARM repeat 136 521 IPR016024 -
Ahy20g1073 843 PANTHER HSDA/SDA1-RELATED 57 843 IPR027312 GO:0000055|GO:0042273
Ahy20g1073 843 MobiDBLite consensus disorder prediction 776 843 - -
Ahy20g1073 843 MobiDBLite consensus disorder prediction 649 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1073 Ahy-Chr20 16649132 16653995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1073 K14856 - gmx:100816774 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1073 20 16649132 16653995 Ahy10g0771 10 9619476 9624289 hybridization