Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1069 ATGAATCCTTTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACAGGGCGAATCCCGTAGCTACGAAATCGCCAACTCACTGCCAGCTAGGGCTCGATGCGTCGGTCAGGACGGTGAACGGCGGCTCCAAATCGAGCTCCTCTGCGCCGGATTCCTCTCATGGCGGTGGCGATTCTCTGAAGTCGTCTTCCGGCGGGAACCGCGGCGAAGAGGAGGATTTGTCAACGACGACGGCGGAGCCCCGGGAGTCGAAGGTGTTCGGTGGCGGGAACGGAGTGGCCGGAAGCGTGGCCGGAATCTTGTACAAGTGGGTGAACTACGGGAAAGGGTGGAGGTCGAGGTGGTTCGTGCTGGAGGATGGAGTGCTTTCGTACTACAAGATTCATGGTCCGGATAAGATCGTGGTGAGCCCAGCGAGGGACCGGAGCGTGAGGGTGATCGGCGAGGAGTCATCGAAGTTCGTGAAGAAGAACAATTGGAGCCTGAATCGAGTAGCAGGAGTTAGTGGTGGCAACTCTACTAAGCAATGCAAGCCCTTCGGTGAGATACACTTGAAGGTTTCTTCGGTTCGGGCTAGCAAATCTGATGATAAGCGGCTATCCATATTTACCGGGACAAAAACTCTACACTTGAGGTGTGTATCTAGAGAAGACAGAGCTATGTGGATTGAGGCCCTGCAGTCCACGAAAGATCTTTTTCCTAGAGCTCTAACAAGTAGTGATCTTGCAACTCCAGAAGATATTGTAGTTTCGACTGAGAAGCTGCGATCTCGATTGTCAGAGGAAGGTATAAGTGAGGCAGTTATTAATGACTGCGAGTCTATTATGCTCTCCGAAGTCTCTTATCTTCAAGGCAAATTGAAGTTTCTTCAGCAGAAACATGTAATGTTGCTGGACACCTTAAAACAACTAGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTGGATGAAACAAAGGAGCGTGAATCATATTGTGGACAAGGGAACAGAAGATTTAGTGATTTCTATTCTGTCATGTCGGAGGGCAGTGCTACTGATTCAGTAGCTGATAATGAAAGTCAAGACGGAGCAGATGTTGAAACTGATGATGATGATGGTGCATTTTTTGACACAAATGAGTTTTTGTGTTCAGATGCCTTAAGAAGTGCTTCTTATCGAAGTAGGGAGGGTATGACAAATGCAAGCATACATGATAGAGATTGTTTACTTTCTGATGGTTTGCATGGGTTTGAGAAGGGAATCAAAGATGTAAGCTATCCATATGTCAGAAGAAGGGATAACTTACCAGAGCCAAAAGAAAAAGAGAGGCCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCAGGAGTTTGTCTCCCTGTGTATTTTAATGAACCGCTCTCTTCATTGCAAAAGTGTTTTGAAGATTTGGAGTATTCATATCTAGTTGATAGGGCATTGGAATGGGGAAAGCAGGAGAATGATTTGATGAGAATCCTAAATGTTGCAGCTTTTGCTGTGTCCGGCTATGCATCCACTGAAGGTCGGCAGTGCAAACCTTTCAATCCTCTACTTGGGGAGACATATGAAGCTGACTATCCAGATAAAGGTCTGAGATTCTTCTCTGAAAAGGTTAGTCATCATCCCATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCGGACTCTAACTTGAAAGGGAAATTCTGGGGGCGTTCTATTCAGTTAGATCCTGTGGGTGTCCTCACCCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCAATTTACAATATCATACTAGGTAAAATTTATTGTGATCACTATGGTACAATGCGCATCAAGGGCAGTGGCAACTACTCTTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGATCGAAACCCACACCAGGTCCATGGATTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTTGATTGGGAAATGGGACGAAGCAATGTACTATGTCCTTGGGGACCCAACTACAAAGCCAAAAGGTTATGATCCAATGACAGAAGCTGCATTATTGTGGGAAAGGGACAACTGCAGCACCAAGACAAGATACAACCTCTCTCCTTTTGCAATATCATTGAATGAAATAATGCCCGGCATGATAGAGAAGTTACCTCCCACTGACTCAAGGTTGAGACCCGATCAAAGACATTTAGAAAATGGAGAATATGAGTTGGCGAATGCAGAGAAATTAAGACTAGAACAGTTGCAGAGACAGGCAAGAAAGATGCAGGAAAGAGGATGGCAGCCTAGATGGTTTCAGAAGAATGAGGATGGGTCTTACCGATACAAGGGTGGCTATTGGGAAGCAAGAGAAAAGCATAGTTGGGATGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCTGAAGATACAATCATTACTCTGTCCTAA 2472 0.4543 MNPLCCIAPVSIDRDRANPVATKSPTHCQLGLDASVRTVNGGSKSSSSAPDSSHGGGDSLKSSSGGNRGEEEDLSTTTAEPRESKVFGGGNGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKIVVSPARDRSVRVIGEESSKFVKKNNWSLNRVAGVSGGNSTKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSTKDLFPRALTSSDLATPEDIVVSTEKLRSRLSEEGISEAVINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDGAFFDTNEFLCSDALRSASYRSREGMTNASIHDRDCLLSDGLHGFEKGIKDVSYPYVRRRDNLPEPKEKERPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQENDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNCSTKTRYNLSPFAISLNEIMPGMIEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFQKNEDGSYRYKGGYWEAREKHSWDGIPDIFGQSCDLPSCSEDTIITLS* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1069 823 MobiDBLite consensus disorder prediction 344 364 - -
Ahy20g1069 823 Pfam Pleckstrin homology domain 99 228 - -
Ahy20g1069 823 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 810 IPR000648 GO:0008289
Ahy20g1069 823 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 810 - -
Ahy20g1069 823 Pfam Oxysterol-binding protein 441 794 IPR000648 GO:0008289
Ahy20g1069 823 SUPERFAMILY Oxysterol-binding protein-like 436 807 IPR037239 -
Ahy20g1069 823 MobiDBLite consensus disorder prediction 65 79 - -
Ahy20g1069 823 MobiDBLite consensus disorder prediction 39 64 - -
Ahy20g1069 823 Coils Coil 748 768 - -
Ahy20g1069 823 Gene3D - 94 233 IPR011993 -
Ahy20g1069 823 Coils Coil 287 321 - -
Ahy20g1069 823 Gene3D - 526 693 - -
Ahy20g1069 823 ProSiteProfiles PH domain profile. 94 231 IPR001849 -
Ahy20g1069 823 CDD PH_ORP_plant 97 235 - -
Ahy20g1069 823 SMART PH_update 95 233 IPR001849 -
Ahy20g1069 823 SUPERFAMILY PH domain-like 16 228 - -
Ahy20g1069 823 Gene3D - 737 801 - -
Ahy20g1069 823 MobiDBLite consensus disorder prediction 39 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1069 Ahy-Chr20 16575893 16582951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1069 K20456 - gmx:100788779 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1069 20 16575893 16582951 Ahy10g0768 10 9581543 9588540 hybridization