Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1054 ATGGCAGCAACAATAGCAACAATGGCCATGGTTAATGCAAAGTGCCTTAACACAAACTCACCCAAGTTTCCAAAGCCCACACCTTCTTCTTCAAGGCCCACTTTTTCCCTCCTTTCCCTTGAGAATCTCCCAAAGGGAATTGCCACCACAAAAAGCTCCAATCCCGTCAACCTTTCAACTTCCATGGCAGGAACTGCCATAGCTGGTGCTATCTTCTCCACCCTTGGAGCCTCCGACGCCGCCTTCGCCGCACAGCAAATCGCCGACATAGCAGACGGCGACAACCGTGGGCTTGCACTGTTGCTGCCCATAATTCCGGCAATTGCATGGGTTCTTTTCAACATCCTGCAGCCAGCACTTAACCAACTGAACCGCATGAGGAGCAGCAAAGGGGTCATTGTTGGGCTTGGGCTTGGGCTTGGTGGGCTTTCAGCATCAGGGATTTTGTGGACACCCGAGGCATCAGCGGCAGTTAGCAATGATTTGGGAATGATTGCTGCTGATGCTGCGAGTGACAACAGGGGTCAGCTTCTGCTGTTTGTTGTGGCACCTGCAATTCTTTGGGTTCTTTACAATATCTTGCAGCCTGCTTTGAACCAACTCAACAGGATGAGATCTCAGTGA 624 0.5112 MAATIATMAMVNAKCLNTNSPKFPKPTPSSSRPTFSLLSLENLPKGIATTKSSNPVNLSTSMAGTAIAGAIFSTLGASDAAFAAQQIADIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNRMRSSKGVIVGLGLGLGGLSASGILWTPEASAAVSNDLGMIAADAASDNRGQLLLFVVAPAILWVLYNILQPALNQLNRMRSQ* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1054 207 Hamap Photosystem II protein Y [psbY]. 94 128 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Ahy20g1054 207 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 207 IPR038760 GO:0009523
Ahy20g1054 207 Pfam Photosystem II protein Y (PsbY) 94 126 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Ahy20g1054 207 Pfam Photosystem II protein Y (PsbY) 172 204 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Ahy20g1054 207 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1054 Ahy-Chr20 16189474 16190406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1054 K02723 - vvi:100252545 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1054 20 16189474 16190406 Ahy10g0758 10 9241850 9242807 hybridization