Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1040 ATGTCGGAAGCTGATTCGGATTCAGGTTCCAATAACGGGCACGACCATGCACCAAATGGGGATTCTGAATCTACCACTTCGGTTGCAATTAATCAGCAGGGTGGTGCCAATGATGGGGAAGATGGAATGTTTGTTGATTGCTCTGATGAGCTTATCACAATGGATAGTAAGCCAAGTGATAATAGCAACGAAGAAGGCGCTGCTGGGGACAATGATAACGGAGAAGAGGTGAATCAAGTTGTGCATCAAGAGGGTCATTTTGGTGAGTTGGGCTCGGCAGGTGAGGTGGAGCAGCTGCGTCGTTCGCTGGAGCTGCAGCAGGAAGAAAGAGAAGCCATTGCACAGGGGGTGATTGATCTTCATTTGCAGCTGAAGGCTTTGAGTTCTCCCAAGTCAGTGCAGTATGAAGGTGAGGATGGAGTTCGCGAGGTGGTGGATGTTCCATTGAAGGAGATGATAAAAGAATCTTTGGAGTTAGTGAAAACTGCTTCGGAGGATTGGCCCAAAGTTTCCAACGATAGTTTGCAAGTTTCAACAGAAGCTCAGCTTGAGAAGGATCATAATATTGAGATTGCATTGGATAAGATGATATCCTCTCTTGGAGCAGTTATTGATCCGTGGCAATTATCAGATCATTCTGTAAGTGGGAAAATAGTTTATATCGAGGAAGGAACTACACTTTTGATTGAGAAGTACAATCAGATTCTTTCTGAAATTTATCAACTCGGGCAATCTTTCTCTGAGGTTGGCTTAGAGCAAGAACATGGGAACATACTTCTTGATGCACGTGGTGGGTTACTGCATTTCAAACGAAAGGAATCAGAATTTGTTGAAAAACTGGCTCATTTAGAAGATGAAAACCGAAAACTTGTTGAAGAGCTTGAGAAGGAAAGGGTGATGATAGGGGAACTAAACTCTGAACTTGGAAATACGAAAGCAGAACTTGAGCAGGAAAAGATTAAATGTGCTAATACCAAAGAGAAGCTAAGTATGGCTGTGACGAAAGGAAAGGCATTGGTACAGCAGCGAGACACTCTAAAGACATCGCTGGCTGAAAAATCCAGTGAGCTGGCTGAAAAATCCAGTGAGCTGGCTGAAAAATCCAGTGAGCTGGAGAAATGTTTAACTGAGTTACAGGAGAAGTCCCTTGCACTAGAAGCTGCTGAATTTATTAAGGAGGAGTTGGCTCGAAGAGATAGTGTGGTTGAATCCCTACAGAACTCATTACTACAAAATAGTACCATTTTTGAACAAGTAGAAGAAATCTTGTCGCATGTAGAACTTGATCGGCATGAAATATCTGATGTGACAGAGAAAGTTAGATGGCTCGTGGATGACAGAAATGTGCTTAAGGATGCTGTTCAGGAGTTACACAAATTGAAAGATACTCTGTCTCTAGTGGACCTACCAGAACATGTCTCATCATCTGATTTGGGATCTCAAATGAATTGGCTGAGGGATTCTTTTCATATGGCTAGGGATGATAATCGTGTTTTGCAGGAAGAAATTTCTAAAATAAATCAAGCATCCTCTAACCATATTGATCGCTTGAGCATTTCGCTTTTGCTGGAATTACAGGAAAAAGATTACCTTCAGTCAGAATTAACTGATTTGAGGTTCAAATACAAGGAGCTTGTTGGCATGAATCATCATCTTTCCTTGGAGAAGGATCAAATGGTGAAGATGTTGGTTGAGCTTTCTGGGGTAAACCTGGAAGATGAAGGGATTGATAAATCCCCTTCTAGCACTACTATGATAATTGATTTATGCTTTCGCAAATTAAAAGAACTGAATGGTCCTGCCTCTGGCACATCTAATATTGATTCTGAGCTGTTTGAAAGGATTCAGAGTTTCTTATATGTTAGGGACCAAGGTTTAATTCTTTATGAGGACATACTGGAAGAAGAGATGGTAATTCGATCTGATTTGAGTAAGCTATCGAATGAGTTGAAAGTGGCGTCCGAGGAAATTACAGCACTTAAAGAAGAAAGGAGCTCTCTAATGAAAGATCTCGAACGATCAGAAGAGAAGTCGTCCATGCTTAGAGATAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGGTTGGTTCAAGATAGGGACAATCTAAAAGGTCTTATAAATGAAAAGGACTCGGAAATAGAGCAATTGAGGATTGATTTGCAGAAGCAAGAATCTGCAGTTTCAGAATACATGGATCAGATCAATAGATTGTCCAGTGAAGTGCAAAACATCCCGAAGTTACAGGCTGATCTTCTGGAAATGGAAAGGGAAAGGAATCAGTTTGAGCAGCTCTTGACAAAGAGCCAAAACATGTTACAAAGAGTGATGGAATATATTGATGGTATTGCTCTTTCAGTTGATCCAGTCTTTGATGAACCTGTGGAAAAGGTAAAATGGTTTGCTGGTTATGTCAGTGAATGCCAAGATGCTAAAGTACATGCAGAACAAGAGTTGCAAATTGCAAAGGAGGAAGCCACTATACTGGAAACCAAATTAGCAGAAGCCCAAGAAAATATAAAATCCCTTGAACGGGGATTATCTTCATTAGAGGAGAGTGTTTCTCAACTTGCTGAGCAAAAGAAAGAGTTAGAACATGAAAAATCAAGAGTTGGGGTGGAGTTAGAGAAGTTTAAAGAAAATGTTGCTGATGCTTGTAGCACTACTCGGTCACTTGAAGATGCCTTATCGCAGGCAGAAAAAGATATATCTGTTCTTTCCAGTGAAAAGGAGCAGGCTCAAGCTGGTAGAGTTGCTGCAGAGACGGAGTTAGAGAGAGTTAAAGATGAAACAATGCAGAAGACAGCCGAACTAGCAGAGGCCAGCAGGACCATAAAAGATCTGGAAGATAAACTATCTCAGGTTCAGACTAATGTCAATTTATTGACTGAAAAATATAATGCTGATCAAGCTGTCAAGACTGATATGGAAAATGAACTGAAGAAGTTGCAAGATGAAGCTGCGAATCATGCTAGAAAATTGGTAGATGCCTCTGATACTATAAGATCACTGGAAGATGAATTAGTAAAGGCACAAGATAATGTTTCTTCTTTAGAGGATGCAAATAAAATGGCTAAAGAGGAGATATCGTCTCTTGGTTTTAAGTTAAAGTCATGCATGGATGAGTTAGCTGGAAGGAGTGGCAGCTTGGAGAACAAGTCTGTAGAGCTCATTGGAATCATTAGTGATCTTCAGGTGCTTATGAAAAACAATATTCTATTTCCCAGAGTCAAACGATGTTTTGAGAGCAAATTTGAGACCCTGAAGAATATGGATCATGTGCTGAATAAAATAAGAGGTCATATTGTTTCCATGGCTGCTAAGGATCTTGAAGGACACCCTATGAAGGAGGAAAATCTGCATATGAGAGAAGAATTACTGGATAGCCTTGAAAATTTTGATGTTGAACTGGATAACAGAGAGATGAATGGCGCTGATATTGACACCGTAGTTTCATCATTTTCAACAATTGTGAAAGGATTTCAGTTGAGAAACAAACACATTGCAGAAAAGTTTGATGAACTTTCTAATTCCATTGATGAGTTTACTTCCCCTCTCCATGAAAAGCTGCTGGATACAGAAACCAAAATAATGACTGTTGTTGAGAACATGCAAACTATGAAAGAAAAAGAAAATACTATCGAGAAGTTACTGGAAGAAAAGGACAATATTATTTCCTCTTTGGAGAATGATATTGGTGTGTTGCTTTCTGCATGCACTGATGCTACTGGTGAACTCCAGTTTGAAGTTGACAAGAGTCTTCAGCAACTGGGCTCTATATCTGAGGTTGAAAATTTAAATCATGAAACCGATGAGCAAGCAGAGCATCATAAGGACAGAATATATGCCGAAGCCTCACAAAAGTTGAAAAATGCTTCTAGAAAAGCCCGAACTTTGATTAGACATTTTGAAAATCAAAGTGAGCATGTAGCTGTAGCCATTGAAAATTTGCAGATTAAGCTGAAAGAAACAACAGCTGCTTTTGAAAGGACCCTAGATGAAAGAGACGCAAACACTGCAAGAATTGAAGGTTTGCAGATTGAATTGAAAGAAATAAAAGATTCTCTTGAAAGGGCCACAAATGAAAGAGATGCAAACGCTGCAAAAATTGAAGCTTTAGAGAATAAGTTGAAAGAAACAACAGCTACTTTCGAGATGCTCAAAGATGAAAGAGGCTTAAAAACTTCAATTATTGAAGATTTGCAGAATAAATTGAATGAAACAACAGCCGCATTTGAAAACACTGCAGAAGAAAGAACCGTAAATGCTGCGAAAATTGGAGATTTGCAGAATAAATTGAAAGAAACAACAGCTGCTTTTGAAATGGCCATAGATGAAAGAGACATAAACAGAAACAGAGTTTTGCAACTAGAGTCTGATGTTCAAGAACTGCGAAGTTCTTGCAATGAGCTTAGGAATAATTTAGAGGGTCATCATGCCCTAGAAGAAAAGTTAAAGGAAAAAGAGGCAGAGATTTTATCACTGAACAGTACTTTGTCAGCAAAAGAAAAAGTTGCAGAAAGATCCCTTCTTTCAGCATCCCAGGTGAGAGATCTATTTGACAAGGTAGATGGTGTTGAAATCCCTATTTTAGAGTCTGAAGAAAATTATGGTGAGCTTCATACTTCAGCCCCTGCAAAGAAGCTCTTCCACATTGTTGATAGCGTTACTAAGTTGCGCAATCAAATAGACTCCTTGTATCATGATAAAGAAGAGCTTCAATCATCTCTCGAAACTAAGGATCTTGAAATTAAGAATCTGAAGGAGGAAGTCAAACAGCTCAATAGAAATTGGGAAGACTCGAAAATGGCCAAGAATGATTTGTCCGACATCACCTTCGCTTTAGAAAAAGTTTTGGATATTTTGGGTGCTGGTGATTGGGTTGTGGATAGAAAATCAACAGGTTTGAAGGAATTAATATCGGCATTAGAAAAGCATATCAGGGCCATTCTTTTAGAATCTGAAAATTCGAGGTCGAAAGTGCAGGAACTTGGTATTAAGTTGGTAGGAAGTCAGAAGTTTATTGATGAATTAACAACTAAGGTTAAATTACTTGAAGGTTCGCGCAAAGATAAGACTTCTCATCCAGAGGCTGTCCAGCAAAGGAGCTTATTCGACGCATCCTCATCCTCACTAGTTGCTGGGTCTGAGATAACCGAAGTTGAAGAAGCGGGATTGCTAGGCAACAATGCATTATTTCCAGTCTCTTCCGCTGCTAACGTGCGAAATATGCGAAAAGGATCATCTAGTGACCATCTTGCACTTGAAATCGGTGGGGAATCTGATGCTTTAATTAAGAGCACTGATACTGATGATGACAAAGGTCATGCATTTAGGTCGCTGAACACTTCTGGACTTGTACCAAAACAAGGAAAGCTCATTGCTGATCGTATCGATGGATTCTGGGTATCCGGTGGTCGGATTCTGATGAATCGACCAAGAGCAAGATTAGGACTCATCGGATATCTGCTACTCTTGCATATATGGCTACTGGGGACCATCTTGTAG 5505 0.3976 MSEADSDSGSNNGHDHAPNGDSESTTSVAINQQGGANDGEDGMFVDCSDELITMDSKPSDNSNEEGAAGDNDNGEEVNQVVHQEGHFGELGSAGEVEQLRRSLELQQEEREAIAQGVIDLHLQLKALSSPKSVQYEGEDGVREVVDVPLKEMIKESLELVKTASEDWPKVSNDSLQVSTEAQLEKDHNIEIALDKMISSLGAVIDPWQLSDHSVSGKIVYIEEGTTLLIEKYNQILSEIYQLGQSFSEVGLEQEHGNILLDARGGLLHFKRKESEFVEKLAHLEDENRKLVEELEKERVMIGELNSELGNTKAELEQEKIKCANTKEKLSMAVTKGKALVQQRDTLKTSLAEKSSELAEKSSELAEKSSELEKCLTELQEKSLALEAAEFIKEELARRDSVVESLQNSLLQNSTIFEQVEEILSHVELDRHEISDVTEKVRWLVDDRNVLKDAVQELHKLKDTLSLVDLPEHVSSSDLGSQMNWLRDSFHMARDDNRVLQEEISKINQASSNHIDRLSISLLLELQEKDYLQSELTDLRFKYKELVGMNHHLSLEKDQMVKMLVELSGVNLEDEGIDKSPSSTTMIIDLCFRKLKELNGPASGTSNIDSELFERIQSFLYVRDQGLILYEDILEEEMVIRSDLSKLSNELKVASEEITALKEERSSLMKDLERSEEKSSMLRDKLSMAVKKGKGLVQDRDNLKGLINEKDSEIEQLRIDLQKQESAVSEYMDQINRLSSEVQNIPKLQADLLEMERERNQFEQLLTKSQNMLQRVMEYIDGIALSVDPVFDEPVEKVKWFAGYVSECQDAKVHAEQELQIAKEEATILETKLAEAQENIKSLERGLSSLEESVSQLAEQKKELEHEKSRVGVELEKFKENVADACSTTRSLEDALSQAEKDISVLSSEKEQAQAGRVAAETELERVKDETMQKTAELAEASRTIKDLEDKLSQVQTNVNLLTEKYNADQAVKTDMENELKKLQDEAANHARKLVDASDTIRSLEDELVKAQDNVSSLEDANKMAKEEISSLGFKLKSCMDELAGRSGSLENKSVELIGIISDLQVLMKNNILFPRVKRCFESKFETLKNMDHVLNKIRGHIVSMAAKDLEGHPMKEENLHMREELLDSLENFDVELDNREMNGADIDTVVSSFSTIVKGFQLRNKHIAEKFDELSNSIDEFTSPLHEKLLDTETKIMTVVENMQTMKEKENTIEKLLEEKDNIISSLENDIGVLLSACTDATGELQFEVDKSLQQLGSISEVENLNHETDEQAEHHKDRIYAEASQKLKNASRKARTLIRHFENQSEHVAVAIENLQIKLKETTAAFERTLDERDANTARIEGLQIELKEIKDSLERATNERDANAAKIEALENKLKETTATFEMLKDERGLKTSIIEDLQNKLNETTAAFENTAEERTVNAAKIGDLQNKLKETTAAFEMAIDERDINRNRVLQLESDVQELRSSCNELRNNLEGHHALEEKLKEKEAEILSLNSTLSAKEKVAERSLLSASQVRDLFDKVDGVEIPILESEENYGELHTSAPAKKLFHIVDSVTKLRNQIDSLYHDKEELQSSLETKDLEIKNLKEEVKQLNRNWEDSKMAKNDLSDITFALEKVLDILGAGDWVVDRKSTGLKELISALEKHIRAILLESENSRSKVQELGIKLVGSQKFIDELTTKVKLLEGSRKDKTSHPEAVQQRSLFDASSSSLVAGSEITEVEEAGLLGNNALFPVSSAANVRNMRKGSSSDHLALEIGGESDALIKSTDTDDDKGHAFRSLNTSGLVPKQGKLIADRIDGFWVSGGRILMNRPRARLGLIGYLLLLHIWLLGTIL* 1835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1040 1834 Coils Coil 1199 1226 - -
Ahy20g1040 1834 PANTHER - 1026 1400 - -
Ahy20g1040 1834 Coils Coil 1397 1417 - -
Ahy20g1040 1834 Coils Coil 699 740 - -
Ahy20g1040 1834 Coils Coil 888 1027 - -
Ahy20g1040 1834 Coils Coil 96 116 - -
Ahy20g1040 1834 PANTHER BNAA09G28150D PROTEIN 1026 1400 - -
Ahy20g1040 1834 PANTHER BNAA09G28150D PROTEIN 326 362 - -
Ahy20g1040 1834 PANTHER BNAA09G28150D PROTEIN 363 872 - -
Ahy20g1040 1834 Gene3D - 629 790 - -
Ahy20g1040 1834 PANTHER BNAA09G28150D PROTEIN 36 324 - -
Ahy20g1040 1834 Coils Coil 273 328 - -
Ahy20g1040 1834 Coils Coil 1453 1504 - -
Ahy20g1040 1834 PANTHER - 36 324 - -
Ahy20g1040 1834 Coils Coil 350 381 - -
Ahy20g1040 1834 Coils Coil 1259 1279 - -
Ahy20g1040 1834 Coils Coil 804 880 - -
Ahy20g1040 1834 SUPERFAMILY Tropomyosin 875 1039 - -
Ahy20g1040 1834 Coils Coil 1341 1389 - -
Ahy20g1040 1834 MobiDBLite consensus disorder prediction 1 74 - -
Ahy20g1040 1834 Coils Coil 744 774 - -
Ahy20g1040 1834 Gene3D - 818 1033 - -
Ahy20g1040 1834 Coils Coil 1313 1333 - -
Ahy20g1040 1834 PANTHER BNAA09G28150D PROTEIN 1413 1834 - -
Ahy20g1040 1834 PANTHER BNAA09G28150D PROTEIN 969 1022 - -
Ahy20g1040 1834 Coils Coil 1281 1301 - -
Ahy20g1040 1834 Coils Coil 643 677 - -
Ahy20g1040 1834 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 641 850 - -
Ahy20g1040 1834 PANTHER - 363 872 - -
Ahy20g1040 1834 PANTHER - 326 362 - -
Ahy20g1040 1834 PANTHER - 913 964 - -
Ahy20g1040 1834 PANTHER - 1413 1834 - -
Ahy20g1040 1834 PANTHER - 969 1022 - -
Ahy20g1040 1834 Coils Coil 1555 1603 - -
Ahy20g1040 1834 MobiDBLite consensus disorder prediction 1 34 - -
Ahy20g1040 1834 MobiDBLite consensus disorder prediction 54 68 - -
Ahy20g1040 1834 PANTHER BNAA09G28150D PROTEIN 913 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1040 Ahy-Chr20 15847103 15854683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1040 - - ccaj:109802875 1962.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1040 20 15847103 15854683 Ahy20g1040 20 15847103 15854683 ECH
Ahy20g1040 20 15847103 15854683 Ahy10g0750 10 9071801 9079245 hybridization