Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1020 ATGTTCAAGCAGATATTTAAACTCCCTAAAAAGTCGTCCAAAAATTCGGAGAATCGAGAACACGGTGGTGGAAGCAGCACAAGTGGAAGAAGCCATGGTGGTGGTGTTGGTTCCAAAAACAGTGATCTTGTTCCTCCTGGGGGAAGCAAAACTGGGAATTCTTCAGTGTTGCAGCCCCAACATCACCCTGCTTTGAATTCCGGTCAGCACCATGGGAATCGGGTTCAATTGCCGTTGGCCGCAGGCGAAAACCCCAATGGGAATTTGAGTGCATATGAGGTACCTTTGGCTGCATTCAGGGATGTTCCCAATTCGGAGAAGCCAGGATTGTTCATCAAGAAGCTCAGGATGTGCAGTGTTGTGTTTGACTTTACTGACCCCACGAAGCACCTAAAGGAAAAGGAAATCAAGAGGCAGGCTTTGGTGGAATTGGTGGATTATGTGACTTCTGCCAATGCTAAGTTTTCGGAATCTATGATACAAGAGGTTGTTAAAACCGTGTCTGCTAATATATTCAGGACGCTTAGCCCTCAGCCTCGTGAGAACAAGCTTGTTGATGGTGTTGATGTGGAGGAGGAGGAGCCATCAATGGATCCTGCGTGGCCTCATTTGCAAATCGTGTATGAGCTTTTTCTGAGATTTGTGGCTTCGCCGGAGCTGGATGCGAAGTTGGCTAAGAGATTCATTGATCAATCTTTCATTTTGAGGCTGCTGGATTTGTTTGACTCTGAGGATCCTAGAGAACGTGAATACTTGAAGATGACCTTGCATCGCATCTACGGGAAGTTCATGGCGCATCGCCCTTTCATCAGGAAATCCATCAATAATATCTTTTACAATTTTATTTTTGAATCCGAGAAGCATAATGGGATTGCTGAGTTCTTGGAAATTCTGGGGAGCATCATTAATGGTTTCGCGCTACCATTGAAAGAAGAGCATAAATTGTTTCTTGTTCGTGTGTTGATTCCACTGCACAAACCAAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGCATTACTCAATTTGTGGAGAAAGATTGCAAGCTTGCTGATACTATTATTAGGGGACTATTGAAGTACTGGCCGATAACCAATAGTTCCAAGGAAGTTATGTTCCTGAGTGAGCTAGAAGAAGTTCTAGAAGCAACTCAACCTCCAGAGTTCCAGCGTTGTATGATGCCATTATTTCGCCGCATCGCCCATTGTTTAAACAGCCCCCATTTTCAGGTGGCCGAAAGAGCTTTGTTCTTATGGAACAACGATCACATCGTGAACTTAATCAAACAAAACCGCAAAGTGATACTGCCCATCATCTTCCCGGCGTTGGAGCGAAACGCTAGAAGCCACTGGAATCAGGCTGTCCATAGTTTGACGTTAAACGTGCGGAAGATATTCAATGATCTTGATCCTGACTTGTCGAAAGAATGCTTACAGAAGTTTGAGGAGGATATATTGAAGGAAGACGCAGTCACGGCAGGGCGTGAGGCCACGTGGAAACGGTTAGAGGAGCTTGCCGCGAAGAAAGCTGCGAGCAACGAATCAGTGCTTGTTGGTAAGGTCGCTGCTATGCAGGTTAGATAG 1587 0.4512 MFKQIFKLPKKSSKNSENREHGGGSSTSGRSHGGGVGSKNSDLVPPGGSKTGNSSVLQPQHHPALNSGQHHGNRVQLPLAAGENPNGNLSAYEVPLAAFRDVPNSEKPGLFIKKLRMCSVVFDFTDPTKHLKEKEIKRQALVELVDYVTSANAKFSESMIQEVVKTVSANIFRTLSPQPRENKLVDGVDVEEEEPSMDPAWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMTLHRIYGKFMAHRPFIRKSINNIFYNFIFESEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRVLIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQRCMMPLFRRIAHCLNSPHFQVAERALFLWNNDHIVNLIKQNRKVILPIIFPALERNARSHWNQAVHSLTLNVRKIFNDLDPDLSKECLQKFEEDILKEDAVTAGREATWKRLEELAAKKAASNESVLVGKVAAMQVR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1020 528 MobiDBLite consensus disorder prediction 1 72 - -
Ahy20g1020 528 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 524 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy20g1020 528 MobiDBLite consensus disorder prediction 44 72 - -
Ahy20g1020 528 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 97 507 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy20g1020 528 SUPERFAMILY ARM repeat 109 489 IPR016024 -
Ahy20g1020 528 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 524 - -
Ahy20g1020 528 MobiDBLite consensus disorder prediction 19 35 - -
Ahy20g1020 528 Gene3D - 103 506 IPR011989 -
Ahy20g1020 528 PIRSF PP2A_B56 2 526 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1020 Ahy-Chr20 15087136 15092439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1020 K11584 - gmx:100811438 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1020 20 15087136 15092439 Ahy20g1020 20 15087136 15092439 ECH
Ahy20g1020 20 15087136 15092439 Ahy10g0731 10 8471419 8476674 hybridization