Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1016 ATGGCGGAAAGTGAAGCAAATCGCGAGAAAATGGACCAACAGATGAAGAAGAAAGGTCACAGGCGCGTGATCGCTTTCACCGGAGCTGCTGCGGTGGTCGCAATCGCCGCTAACCTCGCCCTCACCTTCATCAAGTACCATAAGGAGAAGAAATCAAGCAAGAAATATCTCGCGGGTTTGTATGTGCGCGTTAACCTAACTGCATCTGAGATTCTCAAGTTAACTGATCAAATTATTGCAAAGTCAAACAAGGTCCACGATTCTATTGCAGCTGTGCCATTGGACAAGGTTACGTACTCGAATGTTATATCACCTCTGGCAGAACTTCAAGCGCAACAATTTCCGTTGATCCAGTCTTGTGTGTTTCCAAAGATGGTATCAACTCGGGAGGATGTGCGCAAAGCAAGTGCTGAAGCAGAGCAAAGGATAGATGCTCATATTGACATGTGCAGCAAACGCGAAGATGTATATATTGTAGTTAAAGCATTTGCAACAAAGGGAGAGTGGATAAATGCTGAAGCCAAATGCTTTGTTCAGATTCTGGTGAGAGACTTTGAGAGAAATGGATTGAACCTCACTGCAAGCAAAAGAGAAGAATTGCTGCGTCTAAGAGCTCAGATTGATGAGTTAAGCTTTAGATATATCCAAAATCTCAATGACGATAGCAAATTTCTTCCCTTCAATGAGGCAGAGTTAGCTGGATTACCACAAGAGTTTCTCAAGTGTTTGGATAAATCTGAAGATGGAAAGTTGAAGATATACTTGCGAAGTCATCATGTTGCAGCTGTTCTTGAATTTTGCAAGGTAGGAACTACAAGACGGATGGTATCAAGGGCATATGGGAATAGATGTGGAGAGGCCAATCTTTCTATTCTGGAAAATCTGGTGCAACAGCGCCATAAATATGCTCGTTTACTTGGCTATTCAAACTATGCAGAGTATGCTGTTGATGTTAGAATGGCAAAGACACCTATGAAGGTGTTTGAGTTCCTGGAGGATCTATCCACCAGTTTAACTGAGCTGGCCATGAAGGAACTTGATACATTGAAGAATTTGAAGAAGAGGGAGGAAGGGGAATTCCCATTTGGAATTGAGGACCTGCTGTATTATGTAAAACGGGTTGAAGACCAGAATTATGATCTTGACTTTGGCGAGCTCAATCAATACTTACCAATAAGTTTAGTTCTATCTGGGATCTTCAAAATTCTTCAAGATCTATTTGGTTTAAGGTTTGAGGAAATAGCAGGAGCTGATGTTTGGCATTCTGATGTTCGAGTGTTTTCAGTATTTGACTTAGGTTCTAGTGAAATCTTAGGTTACTGCTACCTTGATTTGTTTTCAAGGGAAGGGAAATATGGTCATACTTGTGTCATGGCTCTCCAGAACAGTGCATTAACACTCAGTGGGGAACAGCAGATACCAGTTGCATTACTAATATCTCAAATTCAAAAAGATGGCAGCAGTAGTCCTGGGTTGTTGCGGTTCTCCGAAGTGGTCGGTCTATTCCACGAGTTTGGCCATGTGATTCAACAAATTTGCAACCGCTCCTCGTTTGCAAGATTTTCTGGACTACGTGTTGATCCCGACTTCGTGGAAATACCTGCTCAACTCCTAGAAAACTGGTGTTATGAAACCAGCTGTCTGAAGTTGATTTCTGGATTTCATCAGGATATTACAAAGCCGATAAAGGATGATACATGTGAATCAATCAAAAGATGGAGGGCTTCATTTTCGGCACTTAAATTGAAACAAGAGATTCTGTATTGTCTTTTTGATCAAATCATGCATTCTGCGGATAACATAGACATTCGGGAGTTATTCAAGCATCTTCATCCCAAGGTGATGTTAGGTTTGCCAGCATTAGAAGGAACCAATCCAGCTTCATGTTTTCCTTCTAGTGTTATTGGTTATGAAGCCGCTTGCTACAGCCGTGTATGGAGTGAGGTTTTTGCTGCTGATATTTTTGCCTCGAAGTTTTGCAATGATGTTGTAAATCAGCATGCTGGCATGCAATTTAGGAAGAAGGTATTGGCCCCCGGAGGAGCAAAGGATTCTATTGAAGTGTTGTCGGACTTTCTAGGAAGAGAACCTTCAATTCGAGCTTATATTGAGAATAAAGTCAAGTATATTCTGCAGCAATTTTTGTTTAAAGATTATTCTTCGTTGTAA 2169 0.4131 MAESEANREKMDQQMKKKGHRRVIAFTGAAAVVAIAANLALTFIKYHKEKKSSKKYLAGLYVRVNLTASEILKLTDQIIAKSNKVHDSIAAVPLDKVTYSNVISPLAELQAQQFPLIQSCVFPKMVSTREDVRKASAEAEQRIDAHIDMCSKREDVYIVVKAFATKGEWINAEAKCFVQILVRDFERNGLNLTASKREELLRLRAQIDELSFRYIQNLNDDSKFLPFNEAELAGLPQEFLKCLDKSEDGKLKIYLRSHHVAAVLEFCKVGTTRRMVSRAYGNRCGEANLSILENLVQQRHKYARLLGYSNYAEYAVDVRMAKTPMKVFEFLEDLSTSLTELAMKELDTLKNLKKREEGEFPFGIEDLLYYVKRVEDQNYDLDFGELNQYLPISLVLSGIFKILQDLFGLRFEEIAGADVWHSDVRVFSVFDLGSSEILGYCYLDLFSREGKYGHTCVMALQNSALTLSGEQQIPVALLISQIQKDGSSSPGLLRFSEVVGLFHEFGHVIQQICNRSSFARFSGLRVDPDFVEIPAQLLENWCYETSCLKLISGFHQDITKPIKDDTCESIKRWRASFSALKLKQEILYCLFDQIMHSADNIDIRELFKHLHPKVMLGLPALEGTNPASCFPSSVIGYEAACYSRVWSEVFAADIFASKFCNDVVNQHAGMQFRKKVLAPGGAKDSIEVLSDFLGREPSIRAYIENKVKYILQQFLFKDYSSL* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1016 722 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 64 704 - -
Ahy20g1016 722 CDD M3A_TOP 72 704 - -
Ahy20g1016 722 Pfam Peptidase family M3 267 704 IPR001567 GO:0004222|GO:0006508
Ahy20g1016 722 Gene3D Endopeptidase. Chain P; domain 1 42 187 IPR024080 -
Ahy20g1016 722 PANTHER SACCHAROLYSIN 50 708 - -
Ahy20g1016 722 Gene3D Collagenase (Catalytic Domain) 391 541 IPR024079 GO:0008237
Ahy20g1016 722 Gene3D Neurolysin, domain 3 197 703 IPR024077 -
Ahy20g1016 722 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 50 708 IPR045090 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1016 Ahy-Chr20 15017709 15027409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1016 K01392 - gmx:100793518 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1016 20 15017709 15027409 Ahy20g1016 20 15017709 15027409 ECH
Ahy20g1016 20 15017709 15027409 Ahy10g0729 10 8427012 8436757 hybridization