Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g1008 ATGGCCGCCAACAGATGGTTGAAGCCTGAGGTATACCCTCTCTTTGCCTCAGTTGGTGTGGCCGTTGGAATTTGCGCTATGCAACTTGTTAGGAACATAACAACCAACCCTGAAGTCAGGGTACTAAAAGAGAAAAGAAGTGCAGGAATTCTTGAGAATTTTGAAGAGGGTGAGAAGTATTCACAGCACACCGTTAGGAAGTTCGTCCGCAACAAGACGCCCCAGATCATGCCATCTATTAACAAATTCTTCTCCGATCCAAACTAG 267 0.4569 MAANRWLKPEVYPLFASVGVAVGICAMQLVRNITTNPEVRVLKEKRSAGILENFEEGEKYSQHTVRKFVRNKTPQIMPSINKFFSDPN* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g1008 88 Pfam NADH-ubiquinone reductase complex 1 MLRQ subunit 8 75 IPR010530 -
Ahy20g1008 88 PANTHER G-BOX BINDING PROTEIN 2 87 - -
Ahy20g1008 88 PANTHER OS07G0274700 PROTEIN 2 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g1008 Ahy-Chr20 14859364 14860646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g1008 - - qsu:111985483 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1008 20 14859364 14860646 Ahy20g1008 20 14859364 14860646 ECH
Ahy20g1008 20 14859364 14860646 Ahy10g0722 10 8313963 8315203 hybridization