Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0984 ATGAAACTGAGTCCAAGAGAGATAGAAAAGCTAGAACTGCACAATGCTGGATTCCTTGCACAGAAACGCCTTGCTCGTGGTTTAAGACTCAATTATACCGAAGCTATTGCTCTTATAGCAACACAGATTCTGGAATTTGTTCGCGATGGTGAGAAGACTGTGGCAGAACTAATGTGCATTGGGAGAGAACTCTTAGGAAGGAGACAAGTTCTTCCTTCTGTTCCACATCTCTTGGATGCTGTTCAGGTTGAAGCCACTTTTCGTGATGGGACTAAGTTAATCACTGTTCATGACCCAGTTGCTTGCGAGAATGGAAACCTTGAGAAAGCATTGTTTGGTTCTTTTCTTCCAGTACCTTCACTTGACAAGTTTCCCGATAATGAAGAAGATGATAGAATTCCAGGCGAAATAATATGTAGAGGTGGAAGCCTAGTTCTTAACCCTGGAAGGAAGGCTGTACTTCTCAAAGTTGTCAACAAGGGAGACAGGCCAATTCAGGTTGGCAGTCACTACCATTTTATTGAAGTAAATCCCTACTTAACCTTTGATAGAAAGAAAGCATATGGCATGCGCCTCAATATAGCTGCAGGGACTGCAACACGCTTTGAGCCCGGGGAATGTAAAAGTGTTGTACTTGTAAGCATTGGAGGTAACCAAGTCATCAGAGGAGGTAATAACATTGCTGATGGGCCAGTTACTGTTTCCAATTGTGTAGCAGCCATGGAGGCTGTGAAGACACGACAATTCGGGCATATGGAAGAGGAAAATGCAAGGGAAGGTATTACTGGGGAAGATGATTCACTTACTACAGAAATTCCTCTAGAGGAATATGCTAACAAGTATGGCCCTACTACTGGTGACAAAATCCGTCTTGGTGATACCGACTTGTTTGCGGAAATTGAAAATGATTTTACTGCCTATGGTGATGAATGTGTTTTCGGAGGGGGGAAAGTCATAAGAGATGGAATGGGTCAGTCATGCGGCCATCCATCTGCTCACTGCTTGGATACTGTTATAACAAATGCTATGATAATCGATTATACTGGAATTATCAAGGCAGATATTGGTATCAAAGATGGCCGAATCATCTTGATTGGAAAAACAGGAAATCCAGACATCATGAATGGAATACTTCCAAATAATATGATCATTGGGGCTAACACTGAAGCTATTGCTGGAGAGGGTTTGATTGTAACAGCTGGGGCCGTAGATTGTCATGTGCATTTTATATGCCCTCAATTAGCATATGAAGCCATATCAAGTGGTATCACTACATTAGTTGGAGGAGGAACAGGACCAGCTGATGGAACACGTGCTACTACTTGTACGCCGGCTCCAATTCAGATGAAAATGATGCTGCAATCAACGGATGACCTGCCTCTAAACTTTGGTTTCACAGGCAAAGGGAACAGTGCTAAGCCTGAGGACCTACATGACATAATCAGGGCAGGAGCTATGGGACTGAAGCTGCATGAGGATTGGGGAACTACACCTGCTGCAATAGATAGTTGTTTAACCATTGCGGAACAATATGATATCCAGGTTAATATACATACTGACACGTTGAATGAATCTGGATTTGTGGAACATACAATTGATGCATTTAAAGGAAGAACTATTCATACTTATCACAGTGAAGGTGCAGGCGGTGGCCATGCTCCTGATATCATCAAAGTATGTGGTGTGAAGAATGTTTTGCCCTCATCAACAAACCCCACACGCCCCTATACGTCTAATACCATAGATGAGCATCTTGACATGTTGATGGTATGTCATCATCTTGATAAGAATATTCCAGAGGATGTAGCTTTTGCCGAATCAAGGATCAGAGCCGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGGGCAATTAGCATAATATCTTCTGATTCACAGGCTATGGGTCGAATTGGCGAGGTTATTAGTAGAACATGGCAAACTGCCAGTAAGATGAAGTTGCAAAGAGGACCACTTAAACCTGGTGATTTGGACAATGACAATGACAACTGTCGGATCAAACGATATGTTGCAAAGTACACTATAAATCCAGCTATAGCAAATGGCTTCTCTCAACACATTGGTTCAGTTGAGGTGGGGAAGTTAGCTGATCTTGTGTTATGGAAGCCGTCATTTTTTGGAGCAAAACCAGAAATGGTAATCAAAGGTGGGGAGGTTGCATGGGCTAACATGGGTGACCCAAATGCGAGCATCCCAACCCCCGAACCGGTCATAATGAGGCCTATGTTCGTAGCATTCGGCAAGGCTAGCAGTGCACACTCTATTGCTTTCGTGAGCAAGGCTGCTTCACGGAACAAAGTAAAAGACTTGTATGGACTTCACAAGAGAGTGGAAGCCGTTGAGAATGTGAGGAGGCTCACCAAACTTGACATGAAACTCAATGACTCTCTCCCGGAGATCACTGTCGACCCAGAATCATACACCGTTACAGCGGACGGAGAGGTTCTAACCTGCTCTCCGGCCACGACCATTCCCCTTTCTAGGAATTACTTCCTCTTTTGA 2526 0.4355 MKLSPREIEKLELHNAGFLAQKRLARGLRLNYTEAIALIATQILEFVRDGEKTVAELMCIGRELLGRRQVLPSVPHLLDAVQVEATFRDGTKLITVHDPVACENGNLEKALFGSFLPVPSLDKFPDNEEDDRIPGEIICRGGSLVLNPGRKAVLLKVVNKGDRPIQVGSHYHFIEVNPYLTFDRKKAYGMRLNIAAGTATRFEPGECKSVVLVSIGGNQVIRGGNNIADGPVTVSNCVAAMEAVKTRQFGHMEEENAREGITGEDDSLTTEIPLEEYANKYGPTTGDKIRLGDTDLFAEIENDFTAYGDECVFGGGKVIRDGMGQSCGHPSAHCLDTVITNAMIIDYTGIIKADIGIKDGRIILIGKTGNPDIMNGILPNNMIIGANTEAIAGEGLIVTAGAVDCHVHFICPQLAYEAISSGITTLVGGGTGPADGTRATTCTPAPIQMKMMLQSTDDLPLNFGFTGKGNSAKPEDLHDIIRAGAMGLKLHEDWGTTPAAIDSCLTIAEQYDIQVNIHTDTLNESGFVEHTIDAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTASKMKLQRGPLKPGDLDNDNDNCRIKRYVAKYTINPAIANGFSQHIGSVEVGKLADLVLWKPSFFGAKPEMVIKGGEVAWANMGDPNASIPTPEPVIMRPMFVAFGKASSAHSIAFVSKAASRNKVKDLYGLHKRVEAVENVRRLTKLDMKLNDSLPEITVDPESYTVTADGEVLTCSPATTIPLSRNYFLF* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0984 841 Gene3D Urease, subunit C, domain 1 270 754 IPR011059 GO:0016810
Ahy20g0984 841 TIGRFAM urease_alph: urease, alpha subunit 274 841 IPR005848 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 Pfam Urease beta subunit 134 230 IPR002019 GO:0035550|GO:0043419
Ahy20g0984 841 Gene3D - 4 124 IPR036463 GO:0016151|GO:0043419
Ahy20g0984 841 SUPERFAMILY Metallo-dependent hydrolases 401 841 IPR032466 -
Ahy20g0984 841 Pfam Urease subunit beta-alpha linker domain 235 265 IPR040881 -
Ahy20g0984 841 TIGRFAM urease_gam: urease, gamma subunit 1 101 IPR002026 GO:0016151|GO:0043419
Ahy20g0984 841 ProSiteProfiles Urease domain profile. 401 841 IPR017951 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 PRINTS Urea amidohydrolase (urease) protein signature 567 584 IPR005848 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 PRINTS Urea amidohydrolase (urease) protein signature 606 622 IPR005848 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 PRINTS Urea amidohydrolase (urease) protein signature 701 714 IPR005848 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 PRINTS Urea amidohydrolase (urease) protein signature 675 690 IPR005848 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 Gene3D - 401 822 - -
Ahy20g0984 841 CDD Urease_alpha 271 840 IPR005848 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 ProSitePatterns Urease active site. 589 605 IPR017950 GO:0009039
Ahy20g0984 841 SUPERFAMILY Composite domain of metallo-dependent hydrolases 271 449 IPR011059 GO:0016810
Ahy20g0984 841 SUPERFAMILY Urease, gamma-subunit 1 104 IPR036463 GO:0016151|GO:0043419
Ahy20g0984 841 Pfam Amidohydrolase family 397 724 IPR006680 GO:0016787
Ahy20g0984 841 SUPERFAMILY Urease, beta-subunit 133 261 IPR036461 -
Ahy20g0984 841 CDD Urease_gamma 4 100 IPR002026 GO:0016151|GO:0043419
Ahy20g0984 841 ProSitePatterns Urease nickel ligands signature. 399 412 IPR029754 GO:0016151
Ahy20g0984 841 Hamap Urease subunit alpha [ureC]. 270 841 IPR005848 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 Pfam Urease, gamma subunit 1 100 IPR002026 GO:0016151|GO:0043419
Ahy20g0984 841 TIGRFAM urease_beta: urease, beta subunit 133 232 IPR002019 GO:0035550|GO:0043419
Ahy20g0984 841 CDD Urease_beta 133 232 IPR002019 GO:0035550|GO:0043419
Ahy20g0984 841 Hamap Urease subunit beta [ureB]. 132 232 IPR002019 GO:0035550|GO:0043419
Ahy20g0984 841 PIRSF Urease 1 841 IPR008221 GO:0006807|GO:0009039|GO:0016151
Ahy20g0984 841 PANTHER UREASE 1 841 - -
Ahy20g0984 841 Gene3D Urease, beta subunit 150 269 IPR036461 -
Ahy20g0984 841 SUPERFAMILY Composite domain of metallo-dependent hydrolases 697 751 IPR011059 GO:0016810
Ahy20g0984 841 Pfam Urease alpha-subunit, N-terminal domain 272 391 IPR011612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0984 Ahy-Chr20 14278198 14285573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0984 K01427 - gmx:547672 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0984 20 14278198 14285573 Ahy20g0984 20 14278198 14285573 ECH
Ahy20g0984 20 14278198 14285573 Ahy10g0705 10 7917233 7927726 hybridization