Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0981 ATGATGTTGGTGAATTCTGGATCGATACGGAAACAGGTTTTTCCGATTGATTATGAGAGAGAAGTGTCGCAGAGGCTGGTTGATGCTGTTCATTACGGAAAAAACGACACTGCGTTGGAGCTAATGGCGGATCTCTACGTGGACGTGAACTTCGTGGGAACGGTGTCGTTTAAGTCCAAAACGACGGAGATCGTGCTGAACGATGAGTCGGCTCACCGAGTTAAATCGGTGTACGAGGAGTTCAAGACGGAGGTTACTGCTCTGTTCCTTGCCGCGCATTCTAACAACTTGACTCTACTCAGAAAGCTTTTGAGTGTCGGAGGCGACATAAACACGAGAGTGTTTCGCGGGTATGCGACGACGGCGACGGTGAGGGAAGGGCATCTAAAAGTGTTGGAGGTGCTCATCAATGGCGGGGCATCACAGCATGCATGTGAGGAGGCTTTGATGGAAACAAGCTACATGGGACGTGCCAGGTTTAGTGAGCTTCTCATGCAGACACACATGATTCGTCCTCATGTTGCTGTTCATGCTCTTGTCTCTGCTTCTTCCAGAGGCTTCGTTGATGTTGTTGACGTACTCATCAAGCATGGAGTGGATGTGAATGCAATTGATAGGACATTGCTGCAATCTTCGAAGCCATTTCTCCACGCCAATGTTGATTGCAATGCTTTGTTCGCTGCTGTTGTTAGCAGGCAGATTGATGTTGTCAGATTATTGTTGCAGGTTGGTGTAAAGCTTGATATGAAGGTGAAACTAGGGGCATGGTCATGGGAAACAGAAACAGGGGAAGAATTTCGAGTTGGTGTTGGTCTAGCCGAAGCATACCCTATAACATGGTGTGCTGTGGAATATTTTGAATCCACTGGTTCTATATTGCAGATGCTTCTTAGCCATATTTCCCCAAATACATTGCACATTGGAAGAACCCTCTTGCACCATGCCATTATCTGCAACAATGAGAAAGCTCTTAACATACTTCTAAAGAATGGCGCGAATGTTGAAGCGCCGGTGCAAACGGATGTGCACCCAATTCACATGGCTGCAAGGCTTGGATCATGCAGCATTCTTCAATGCTTGATTAAAGGTGGGTGTGACTTGGATTCAAGAACAAAATCTGGTGACACTGCAGTAATGATTTGTGTAAGGTATAAGCATGAGAAGTGCCTTAAAGTGTTAGCATCATCAGGTGCTGATTTGGGTTTGGTGAATTCATCTGGTCATTGTTTAGCTTCCATAGCGAATTCTGTTCAATGGAGTAATGTGTTCCAGAGAGTAATCCTTGATGTGATTAGATCAGGAAAGGTTGTTAAATCAAGCAATGCTTCGAGATTTTCTGCTTTGTTGTTTGCGACTCGCGCGAATGACATAGAGGGTGTTAAGAAACTTATTGAGAATGGCAACATTGATATGAATGAGCAAAATGAAAATGGTTTCTCGGCCGCGATGATCGCGGCTGCTATGGGTAATGTTGAGGCTTTTAGGCTTCTTCTTTTCGCCGGCGCCGACATACTTGAGCTTAAAAACAAGTATGGTTTGACAGCACTTAACCTCATAGATGTTAGCCAAAATGGTGAAGCATTTCAAAAGGTGATGCTTGAATTCGCGGTTAAAAGAGGGTGTGAAATTGAAGGTTCTAACGAAGTGAATCCTTTACACAGGGCAGCAAGATATGGAGCCATAGACATTGTTCAAAAGCTGTTAAAAGAAGGGAATTATGATGTGAATTCGTTTGATTCACAAGGATACACCCCATTGATGCTAGCGGCTAAAGCTTGCCGCGGCGACATGTGTAAGCTTTTGATCTCATTTGGAGCCAAATGTGAAGTTGAGAATGAGAGGCATGAGACAGCACTTTCACTAGCAAGAGAAAATGGAAATGGAAATGAAGCAGAGTTTTTGATATTAGATGAGGTAGCTAGAAGGTTAGTGTTGTGTGGTGGTAGAGTTAAGAAACACACAAAGTGTGGTAAAGGATCACCGCATAGCAAACAACTCAGGATGGTTAAGGTTGCTGGGATTTTAAGGTGGGGAAAAGCAAGTAAAAGGAATGTGGTTTGTGAAAATGCTAAGGTTGGAGCAAGTGAGAGATTTAGGTGGAATAGAAGGAAGAAGTTTGATGTTGATGAAGCAGGAATTTTTCATGTGGTTACTACAAAGAATAAGGAAGTGCATTTTGTATGTGAGGGTGGGGTGCAAATGGCTGAGTTGTGGGTTAGAGGTATTAGATTGGTTACAAGAGAAGCCTTTTTTGGTAATACTACTTAA 2268 0.4361 MMLVNSGSIRKQVFPIDYEREVSQRLVDAVHYGKNDTALELMADLYVDVNFVGTVSFKSKTTEIVLNDESAHRVKSVYEEFKTEVTALFLAAHSNNLTLLRKLLSVGGDINTRVFRGYATTATVREGHLKVLEVLINGGASQHACEEALMETSYMGRARFSELLMQTHMIRPHVAVHALVSASSRGFVDVVDVLIKHGVDVNAIDRTLLQSSKPFLHANVDCNALFAAVVSRQIDVVRLLLQVGVKLDMKVKLGAWSWETETGEEFRVGVGLAEAYPITWCAVEYFESTGSILQMLLSHISPNTLHIGRTLLHHAIICNNEKALNILLKNGANVEAPVQTDVHPIHMAARLGSCSILQCLIKGGCDLDSRTKSGDTAVMICVRYKHEKCLKVLASSGADLGLVNSSGHCLASIANSVQWSNVFQRVILDVIRSGKVVKSSNASRFSALLFATRANDIEGVKKLIENGNIDMNEQNENGFSAAMIAAAMGNVEAFRLLLFAGADILELKNKYGLTALNLIDVSQNGEAFQKVMLEFAVKRGCEIEGSNEVNPLHRAARYGAIDIVQKLLKEGNYDVNSFDSQGYTPLMLAAKACRGDMCKLLISFGAKCEVENERHETALSLARENGNGNEAEFLILDEVARRLVLCGGRVKKHTKCGKGSPHSKQLRMVKVAGILRWGKASKRNVVCENAKVGASERFRWNRRKKFDVDEAGIFHVVTTKNKEVHFVCEGGVQMAELWVRGIRLVTREAFFGNTT* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0981 755 Gene3D - 393 525 IPR036770 -
Ahy20g0981 755 SUPERFAMILY Ankyrin repeat 307 623 IPR036770 -
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 373 405 IPR002110 GO:0005515
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 178 206 IPR002110 GO:0005515
Ahy20g0981 755 PANTHER ANKYRIN REPEAT-CONTAINING 8 753 - -
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat region circular profile. 547 571 - -
Ahy20g0981 755 SMART ANK_2a 340 369 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 83 112 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 477 506 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 373 402 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 174 203 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 115 144 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 581 610 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 220 249 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 443 473 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 307 336 IPR002110 GO:0005515
Ahy20g0981 755 SMART ANK_2a 547 577 IPR002110 GO:0005515
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat region circular profile. 581 613 - -
Ahy20g0981 755 Gene3D - 526 635 IPR036770 -
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 547 571 IPR002110 GO:0005515
Ahy20g0981 755 Gene3D - 272 392 IPR036770 -
Ahy20g0981 755 PANTHER ANKYRIN DOMAIN PROTEIN 8 753 - -
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 340 372 IPR002110 GO:0005515
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat region circular profile. 307 336 - -
Ahy20g0981 755 Pfam Ankyrin repeats (many copies) 450 498 IPR002110 GO:0005515
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat region circular profile. 477 504 - -
Ahy20g0981 755 Gene3D - 15 167 IPR036770 -
Ahy20g0981 755 Gene3D - 168 261 IPR036770 -
Ahy20g0981 755 Pfam Ankyrin repeats (3 copies) 343 402 IPR002110 GO:0005515
Ahy20g0981 755 Pfam Ankyrin repeats (3 copies) 532 610 IPR002110 GO:0005515
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Ahy20g0981 755 SUPERFAMILY Ankyrin repeat 26 254 IPR036770 -
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 477 509 IPR002110 GO:0005515
Ahy20g0981 755 ProSiteProfiles Ankyrin repeat profile. 307 339 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0981 Ahy-Chr20 14193936 14199237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g0981 347 602 Miscellaneous Gene Families AT3G09550 25.962 1.25e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0981 - - gmx:100795638 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0981 20 14193936 14199237 Ahy20g0981 20 14193936 14199237 ECH
Ahy20g0981 20 14193936 14199237 Ahy10g0702 10 7797521 7802796 hybridization