Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0980 ATGCCGCAATCAGAAAAGTCATTCAGTAACAAACTTCCAATAATCTGGATTCCAGGGGATGGCAGATGTTTGTTTAGGTCTGTAGTGTATGGTGCATGCCTTAGAAGAAGGGAGCCATCTCCAAGTCTCAATAGGCAAAAAGAACTTGCAGATGACCTTAGAGCCAAAGTCGTAGATGAATTCATCAAGAGGAGGGCAGATACTGAATGGTTTCTTGAGGATGACTTTGACACCTACACAGGACAAATGCGAAAGCCTCACGTTTGGGGAGGAGAACCTGAACTTCTTATGTCCTCACATGTTTTACAGATGCCTATAACAGTGGTGATGGAGGATAAGAAATCCAAGAATCTTAAAGTAATAGCTGAATATGGTCAAGAGTATGGTGAGGATAACCCAATTTGTGTTATCTATCACGGTTATGGCCACTATGATGCCTTCAAGAATTCCAATAACACTACATATTCGCAGAAATGA 477 0.413 MPQSEKSFSNKLPIIWIPGDGRCLFRSVVYGACLRRREPSPSLNRQKELADDLRAKVVDEFIKRRADTEWFLEDDFDTYTGQMRKPHVWGGEPELLMSSHVLQMPITVVMEDKKSKNLKVIAEYGQEYGEDNPICVIYHGYGHYDAFKNSNNTTYSQK* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0980 158 SUPERFAMILY Cysteine proteinases 12 149 IPR038765 -
Ahy20g0980 158 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
Ahy20g0980 158 PANTHER OTU DOMAIN CONTAINING PROTEIN 10 156 - -
Ahy20g0980 158 Gene3D - 2 157 - -
Ahy20g0980 158 Pfam OTU-like cysteine protease 18 144 IPR003323 -
Ahy20g0980 158 PANTHER OS01G0900900 PROTEIN 10 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0980 Ahy-Chr20 14169775 14179468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0980 K18342 - gmx:100792132 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0980 20 14169775 14179468 Ahy20g0980 20 14169775 14179468 ECH