Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0962 ATGCTGGATGCTTTACTATGGTGGGCTTGCTTGTTAATTTTGAGATGCTGTGGAGTAACTGGACTATGGAGTTCTGATGATTCAATGGTAATAGTTGTGGAATTTCTTTTGCTTTCTCCTGCAGAACTCAACCAGGAAGGTTTGACATTCTTCTCAAAAGTAAACATGCAAACCAAGAAAAAGGGCTCCAGACGAAATGCTACTCAACAGCACGGTAGTCCTCGAGTTTCAAGAACACAGAGGAAGGTATCTGAAAATGGGCAAGCAGTTGAAAGGAAAGTTGCTGACTTAATTACATCATCATGCAGAAAAAATAAATCTTTGACTGCACTTGAGAATAAAGCCGGAGAGTCAATTCCTTCAACAAATTTGAGTAATCAGTATGACTTTGTGGACCATGGGACTTCCAATGCTTGGTTGGAAAATGATGCTGTTAATGGTACTTCAGTAGATGTTTTGGGCTACAACAAGCAAGCTGCTCATGTGGAGTCTGGAACTATATTTTCTCCTGGATTTCACTTATCCAAAGGTTCTGGAGGAAAAGTTGTTGACAGAGTTGATTTTGTCAAAATTTTTCAGCATGAGGACCAAAATAGAATTTGTTCTGACCAAGGAACAGATTTGTCACTGGTGGATGCCATAGATGATCCTGATAGTCGAGGATGTGGCACTGCAATGGAAGTAGACATAAATAATTCATCCAACTATGACCAACACAGATGCGGTGATCCAATGCTGGATTTAAGCACAAATGATGTGAATGTTTGCAATTCTGATTTTGATGAAAATGTTTCCTTGGAAGTTTCTGCCATATATCTTGCCATGAAAAACTCAAAGCTGGAATGCAATGATGAACCTGGTCAGGAGTCTATGTCAGCAGATGTATGCCCAGAGGATGATGAATTTGAGGATTTTGATGACTTTGATCCTTACTTATTCATAAAGACCTTACCTGACTTGTCAACGGTGGTTCCTACCTTTAGACGATTGTTGCTACCTAAGCAGACACGGAGCTGTCCTCCTACTACTCTTGTCCTGGACTTGGATGAAACTTTGGTACATTCTACCCTTGAGCCTTGTGAGGATGTCGACTTCACTTTTCCCGTTAATTTCAATTCCGAAGAGCACATTGTATACGTACGCTGCCGCCCTCACCTCAGAGATTTCCTCAACAGAGTTTCTAGCCTTTTCGAGATAATTATATTTACAGCTAGTCAAAGCATTTATGCCGAGCAACTTCTAAACGTGCTTGATCCAAAGAGGAAGATATTTCGCCACCGTGTATACCGTGAATCCTGTGTTTATGTGGAGGGTAATTATCTCAAAGATTTAACAGTGCTTGGTCGTGATTTAGCTCGTGTTATAATAATTGACAACTCCCCTCAGGCATTTGGGTTCCAGGTGGACAATGGAATACCGATCGAGAGTTGGTTTGATGACCGTTCAGATCAAGAATTGCTTTTATTACTTCCATTCTTGGAGAGCCTGGTTGGAGTTGATGATGTACGGCCTTTAATCGCGAAGAAGTTCAATCTCCGGGAGAAAATTGCTGCGGCTGCCCTTCCTCTAAATACAAACAGGAGAGAGTTCTTATCGGAATGA 1602 0.412 MLDALLWWACLLILRCCGVTGLWSSDDSMVIVVEFLLLSPAELNQEGLTFFSKVNMQTKKKGSRRNATQQHGSPRVSRTQRKVSENGQAVERKVADLITSSCRKNKSLTALENKAGESIPSTNLSNQYDFVDHGTSNAWLENDAVNGTSVDVLGYNKQAAHVESGTIFSPGFHLSKGSGGKVVDRVDFVKIFQHEDQNRICSDQGTDLSLVDAIDDPDSRGCGTAMEVDINNSSNYDQHRCGDPMLDLSTNDVNVCNSDFDENVSLEVSAIYLAMKNSKLECNDEPGQESMSADVCPEDDEFEDFDDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPPTTLVLDLDETLVHSTLEPCEDVDFTFPVNFNSEEHIVYVRCRPHLRDFLNRVSSLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLARVIIIDNSPQAFGFQVDNGIPIESWFDDRSDQELLLLLPFLESLVGVDDVRPLIAKKFNLREKIAAAALPLNTNRREFLSE* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0962 533 Gene3D - 327 511 IPR023214 -
Ahy20g0962 533 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 56 520 - -
Ahy20g0962 533 SMART forpap2 340 484 IPR004274 -
Ahy20g0962 533 ProSiteProfiles FCP1 homology domain profile. 337 496 IPR004274 -
Ahy20g0962 533 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 56 520 - -
Ahy20g0962 533 Pfam NLI interacting factor-like phosphatase 343 503 IPR004274 -
Ahy20g0962 533 MobiDBLite consensus disorder prediction 67 84 - -
Ahy20g0962 533 MobiDBLite consensus disorder prediction 57 85 - -
Ahy20g0962 533 SUPERFAMILY HAD-like 330 507 IPR036412 -
Ahy20g0962 533 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 342 505 IPR011948 GO:0016791
Ahy20g0962 533 CDD HAD_FCP1-like 343 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0962 Ahy-Chr20 13674394 13679414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0962 K17616 K12778 gmx:100804307 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0962 20 13674394 13679414 Ahy20g0962 20 13674394 13679414 ECH
Ahy20g0962 20 13674394 13679414 Ahy10g0678 10 7395376 7400403 hybridization