Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0938 ATGTACGGATCCGAGAATAACAGGGAAGATTCGGAGCGGACCGCTTTCAGAAGAGCGGAGAAGAATTACAAGCTCTACTACGATACCAATGCTTCCAAGAACAAAAAGAAGAAAAAACCCAAACCGGTGGACTTGACGGAAGTTCTTGACTTCCGTTCAATTTTAGAATGCCACGATCGAAACGGCGAGCTTCCTCCGTTTGTTAATGTCATTCACGACAAGTTCAGCTCCCCTGTGTTCTCCTTGCAAAATCGCCCAGGTTTTTATTTTATTCCTGGGGCGTTGAGCATAGAGAAACAATGCAGTTTGATAAGGGAGAGTTTGATTGATTTCCCACAGCCACCTAATAGAACAAATCACAATGCGATCTATGGTCCTATACACAATCTATTTGATGAAGCAAAAGAAGGGAAGGTTCTGGTAGAAGAGTACTCTCCCGATGGTTCACCTAAGCTAGGTCCTGATTGCGATTATCAAGATGGTAAGAGGTGGAAGTTCGTAACAGAAAAGGAAGAGCTATTAAGGAAGGGAAAATCTGTTCCTGCTTCTGCTTTGCTGCGGAAGCTGAGATGGAGCACCCTTGGCCTACAATTCAATTGGTCCAGACGGAACTATGATGTATCTCTCCCACATAACAAAATCCCTGAAGCTCTGTGTGATCTGGCCAAAGAATTGGCTAAACCTGCAATGCCTGCTGGTGTTGAATTCCAGCCTGAAGGTGCAATAGTGAATTACTTTGGTTTAGGTGACACACTGGGTGGCCACCTTGATGACATGGAAGCAGACTGGAGCAAGCCTATAGTTAGCTTAAGTTTGGGCTGCAAAGCTATATTTCTTTTGGGTGGAAAAACTAGAGAGGATCCTCCTTTGGCAATGTTTCTTAGAAGTGGTGATGTTGTACTCATGGCCGGAGAAGCAAGGGAATGCTTTCATGGTGTTCCACGGATATTCACAGATGAAAAAAATGCTGAAATAGACCATCTTCAGGCACAACTTTCACATGAAGATGATCTTTGTTTCTTAAAATACATTCAAACTTCAAGGATCAATATCAACATCAGACAAGTTTTTTGA 1074 0.4302 MYGSENNREDSERTAFRRAEKNYKLYYDTNASKNKKKKKPKPVDLTEVLDFRSILECHDRNGELPPFVNVIHDKFSSPVFSLQNRPGFYFIPGALSIEKQCSLIRESLIDFPQPPNRTNHNAIYGPIHNLFDEAKEGKVLVEEYSPDGSPKLGPDCDYQDGKRWKFVTEKEELLRKGKSVPASALLRKLRWSTLGLQFNWSRRNYDVSLPHNKIPEALCDLAKELAKPAMPAGVEFQPEGAIVNYFGLGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKTREDPPLAMFLRSGDVVLMAGEARECFHGVPRIFTDEKNAEIDHLQAQLSHEDDLCFLKYIQTSRININIRQVF* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0938 357 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 237 357 IPR005123 -
Ahy20g0938 357 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 1 357 IPR004574 -
Ahy20g0938 357 Gene3D - 132 356 IPR037151 -
Ahy20g0938 357 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB 1 357 - -
Ahy20g0938 357 Pfam 2OG-Fe(II) oxygenase superfamily 176 354 IPR027450 -
Ahy20g0938 357 SUPERFAMILY Clavaminate synthase-like 86 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0938 Ahy-Chr20 12622210 12625019 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0938 K10765 - gmx:100811774 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0938 20 12622210 12625019 Ahy20g0938 20 12622210 12625019 ECH
Ahy20g0938 20 12622210 12625019 Ahy10g0666 10 7114596 7117474 hybridization