Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0800 ATGGCAAGTAGAAGAGCAAGATGCATGCAGTGTGGAAGGCCTGTGGTGGTGCCAATGCAAGCCTATAATGTTTACATTCTGTGTTCTGGCTGCCAAGGCTATCCACAAGTCCAACCCAACTACCCTTTACTCAACAGCACTCCTTCCTTCATCAATTTTGCTCCTGGATTTTCGAGGCCTTACCCGCTGCCGCCTTCTCCTGCTTCTGCATATGGTAACAAGAGAGCTGTGTTGTTTGGTATTAGCTATGCTAAGCAAAATAACAGGATCAAAGGCGCTGTGAATGATGCTCACTGCATGAAGTACTTTCTCATTGACAAGTTGGGTTTCCCTACTGATTCCATTCGCATGCTCACAGATGATCCAGAAGAGAGAAACCCTCTAAGAATTCCAACAATGCACAACATGAGAATGGCGATGAGGTGGTTGGTGGAAGGCTGCCGGGCAGGGGACTCATTGGTGTTCTACTACTCCGGACACGGATCGAGGGTAGTGGACCGTAACATGGATGAGGTTGATGGGTATGATGAAGCAATCTGCCCTGTTGATTATGAGCATGAGGGCAAGATAATTGATGATGAGATCAATGCAACAATCGTCCGCCCTCTGCCACGTGGCGCCAAGCTCCACGCCCTTGTTGATACATGCTTTAGCGGCACTGTTCTTGATTTACCCTTCATGTGCAGGATGAACCGAAAAGGTTATTATGGATGGGAAGATCACAGAAGCCGGAGAGGTGCATACAAAGGCACAAATGGAGGAGTAGCTGTTTGCATTTCGGCTTGTGATGATGATGGAAGTGCGGCAGATACATCGGCATTTAGCGGCATGGAAAGTAGTGGAGCGTTGACTTACAGTTTCATTCAAGCCATGCAAGATGAAGCTAAACTCACTTATGGCCGCTTGCTGAATGCTATGCGCTCCACCATCCGTGACGCTAAGGAAGGACAGTTTGGTCCTAACTACCAAGATTATGCCGCCATGGAATCTCGCCTGCAATATGCTCATGAGCCACAGATATCGTCATCTGAAAAGTTTGATATTTATTCGAAGCCTATTTTAATGTGA 1068 0.4719 MASRRARCMQCGRPVVVPMQAYNVYILCSGCQGYPQVQPNYPLLNSTPSFINFAPGFSRPYPLPPSPASAYGNKRAVLFGISYAKQNNRIKGAVNDAHCMKYFLIDKLGFPTDSIRMLTDDPEERNPLRIPTMHNMRMAMRWLVEGCRAGDSLVFYYSGHGSRVVDRNMDEVDGYDEAICPVDYEHEGKIIDDEINATIVRPLPRGAKLHALVDTCFSGTVLDLPFMCRMNRKGYYGWEDHRSRRGAYKGTNGGVAVCISACDDDGSAADTSAFSGMESSGALTYSFIQAMQDEAKLTYGRLLNAMRSTIRDAKEGQFGPNYQDYAAMESRLQYAHEPQISSSEKFDIYSKPILM* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0800 355 SUPERFAMILY Caspase-like 43 198 IPR029030 -
Ahy20g0800 355 PANTHER METACASPASE-4 1 355 - -
Ahy20g0800 355 Gene3D - 44 354 - -
Ahy20g0800 355 Pfam Caspase domain 74 345 - -
Ahy20g0800 355 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0800 Ahy-Chr20 10174791 10176857 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0800 K22684 - gmx:100779288 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0800 20 10174791 10176857 Ahy20g0800 20 10174791 10176857 ECH
Ahy20g0800 20 10174791 10176857 Ahy10g0527 10 5217021 5219374 hybridization