Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0669 ATGGAACTAGCTCAGCATAGAGCTATGGTGAATGGGAGAGTTGAGGAGATGCATGGGGAAAGTTCTGATCAAGTGCCTCTCAGGGAGTGCCGAATCCGTCCTTCTCACCCTGTAGGATTGGTGAAGAAGAGGGCTTATATCTTTGATGGAATGGGAAATTTTTACAATAAGGACTGGGATCTTGCAGAACTTTATCAGACGGAGCAGGTGGAAACAGATGTAGCAGATGGCCGGGCGAACGAGTTTTCTTGGTACCATGTAGAAATCCCAAAAGGAAATCAAAGGCCTTCACAATCTGCACAAGATCTCATCAGTGTTCTTTGCCCGCCTTTGAAACTCCAAGACATTCTCTCACTTGTTAGCAATGGACCATTTTGTGCACATGTTGATGGGGCACTTGTGTTTCGAGTTAATTCACCTGGTCCTCCCTCTAGTGACTTCACATTTAGACTTTCTGCTAGAATTACAAAAAAGTCAGTAATTACTGTGTCCTTGGGACGTGTTCCCAGATTAGGTTTCTCACGCATGGGTGAATCACTGCTTTCTGAGATTCCTACCGTAGAAAGCTCCTCTCAGTTTAGAGGTCAACAGCAGGAAGGAAGTGGAATTGTGATTATGGAACATGTTCTTGAGTTCTTATTGACAATGAATCACTCCGAGGAAGCTGACAATCCTGTTCCTAGATCTGTCTCAAATCTTGTGGTTCACATAATTGACACACATATAGATCAGATTCAAGATCTTGTGACAAAGATTGAGATGGACTTGGACTCTGTGGAGCTTGATCTAGATAAGGGTGGTTATGCTCTGAAAAAACAAATGCTAGATGACAGAAGATTCCCCAAGCTGCATATTAATTTACAGCGTCTCCTACAGGTAATTTCCCATGGAGAGCAAGTATATCTCCGAGTTAAAGAAAAATGCTCGTCGAAACGGTGGTTTGCCAATGAAGACATCAACTCCCTTGAAGAACTAATTGGAAGGTTAAGGAGGCTGAAGGAGAATGTAGGTTTTATAGCAAATCGTGTAACAGCAGTACAGGCTAGTCTTGACAGCTGGCAGTCGGAGCAAATAAACAGGAAACTGTACTATCTTTCGTTCCTTTCGATAATATTCCTCCCCTTATCCATCATAACAGGAGTGTTTGGCATGAATGTTGGTGGAGTTCCATGGACAGGGCAGAATTCGCCGGAGCTACAAGATGGTTTCCGAAACGTCCTGCTACTCTGCGTGGCGATGCTATTTCTTGTGCTTCTCTGCTTTGTTTTTCCGACTCTTTACACTCGCGTAGCTGCTGTATGGCAGAAAAGGAAAGGTCCCGGAAGAAGCTGGTCACTAAACAGGAAGTCGTTCCTCAAGAGACCGTTACGAATAGGAGATCAAGATAGAGGGGGCTACCTTCGGATCTAA 1410 0.4411 MELAQHRAMVNGRVEEMHGESSDQVPLRECRIRPSHPVGLVKKRAYIFDGMGNFYNKDWDLAELYQTEQVETDVADGRANEFSWYHVEIPKGNQRPSQSAQDLISVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRLSARITKKSVITVSLGRVPRLGFSRMGESLLSEIPTVESSSQFRGQQQEGSGIVIMEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIIDTHIDQIQDLVTKIEMDLDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVISHGEQVYLRVKEKCSSKRWFANEDINSLEELIGRLRRLKENVGFIANRVTAVQASLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNSPELQDGFRNVLLLCVAMLFLVLLCFVFPTLYTRVAAVWQKRKGPGRSWSLNRKSFLKRPLRIGDQDRGGYLRI* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0669 469 PANTHER OS08G0130000 PROTEIN 1 469 - -
Ahy20g0669 469 Pfam CorA-like Mg2+ transporter protein 223 423 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ahy20g0669 469 SUPERFAMILY CorA soluble domain-like 79 353 IPR045861 -
Ahy20g0669 469 Gene3D Magnesium transport protein CorA, transmembrane region 354 426 - -
Ahy20g0669 469 Gene3D Magnesium transport protein CorA, transmembrane region 227 353 - -
Ahy20g0669 469 Coils Coil 315 342 - -
Ahy20g0669 469 PANTHER OS08G0130000 PROTEIN 1 469 - -
Ahy20g0669 469 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 357 422 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0669 Ahy-Chr20 7273355 7277953 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0669 - - gmx:100804031 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0669 20 7273355 7277953 Ahy20g0669 20 7273355 7277953 ECH
Ahy20g0669 20 7273355 7277953 Ahy10g0467 10 4600212 4605000 hybridization