Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0667 ATGGCCGCTAAGAAAAGGAACTCTTCCATCGACGACGAACCTGTCGTCGAAGTACCCGCAGCTGAAACCAACGATTCTCCGAAGCCCCCAAAGAAGAAAACCAAGAAAGACAAAAGCAATAACGACAGTGATGAGCCACAAGAACAGGTGGCGGCAGCATCTGATGGCTCCGTCAAGCCAATGGAGAGGAAGAAGAAGCGCAAAGCTCTCGACAAGGAGAGGCGCCGCACCGCCGCTGACACCGAGCCGAAGCTTCCGGAGCCGTCGACCTCCGCAGCACAGGCTCAGCCAGTGGACTCGCCCGGAACCAGCAGCGGCGGAGGCTCTCAGCTCCCGGAGTTTCACATTGGCGTGTTCAAGGATCTCGCGGTGGCGGCGGAGCCTGCGAGGGAAGCGGCCGCAAAACAGCTGGTGACCGAACTGAAGGCGGTTCAGAGTGCTTACGATGCGCTTGATGAGAAGGAGGTTGGCGACGGAGGGTTCAAGCTTGAAGCTGAAAAGGATGATGGATTGGATGATTGTGCACCTTCTGTTAGATACGCTGTTCGCAGGCTTATTCGTGGTGTTTCTTCCTCTAGAGAGTGTGCACGACAAGGTTTTGCTTTAGGTTTAACACTTTTAGTTGGCGCTGTCCGCAAGATTCGGGTTGAATCATTCCTTAAACTTGTAGTTGATTTATTGGAAGTAACTTCGTCAATGAAGGGTCAGGAGGCAAAGGATTGTCTCTTGGGTCGCTTATTTGCCTATGGTGCATTGGCTAGATCGGGAAGACTTACACAGGAATGGACTATAGATAAAAACACATCATGCATTAGAGAATTTGTCAGTGTAATAATCTCCCTGGCGAATAAAAAGCGGTACTTGCAAGAGCCTGCTGTTTCAATAATTTTAGACTTAACTGAAAAGTTGCCTGTTGAAGCGTTGTTGAATCATGTTGTTGAAGCTCCGGGGATGAAGGAATGGTTTGACGCTGCTATGGAAGTAGGAAATCCTGATGCTTTGCTTCTTGCACTAAAACTACGAGAAAAGATTTCCATTGACAACTCTGCATTTGTCAAACTGCTGCCAAATCCATTCAGCTCTAGCCTGCTCTTTTCCACTGATCAGCTTTCCTCCCTGAGCAATTGCTTGAAGGAGTCAACCTTTTGTCAGCCCCGTGTTCATGGTGTTTGGCCTGTTTTAGTAACTATTCTTTTGCCCAATACTATTATGCAAGAAGAAGATGTGGCAGCAGCTTCAAATTCGTTAAAGAAGCATAAAAAGAGTCGAAAATCAAGCTCCTATGATGAAGAAACTGCAAAGAATCTTCAGTCTTTCTGCGAAATAATTATTGAAGGATCCCTTCTCTTGTCATCTCATGACCGTAAGCATTTAGCTTTTGATGTTCTGTTTCTTCTACTCCAAAAGCTGTCTGCATCTTTGGTTCCAATCATTCTATCAAGCAAAGTTGTTCAGTGCCTTATGGATATACTATCAACGAAAAACACTTGGCTGTATAAAGTTGCTCAGCATTTTCTCAAACAATTGTCCGATTGGGTTGGAGATGATGATGTCAGAAGAGTTGCTGTTATAGTTGCTCTACAGAAACACAGCAATGGAAAATTTGATAATATCACACGAACAAAAGCTGTAAAGGATTTCATGTCACACTTCAAAACAGAAGCAGGTTGCCTGCTTTTTGTTCAGAGCTTGATGAACCTGTTTGTAGATGAAGGCAGTGCCTCGGAAGAACCTTCAGACCAGAGTCAAACTACAGATGAAAATTCCGAAATAGGTTCCGTTGATGATAAGGATTCCCCAAGGTCCAATGGCAATTCTGATTTTTTAAAGAGTTGGATTATTGAATCTCTTCCCAGCATTTTGAAACACTTGAAGCTGGGTCATGAGGAGAAATTCCGAGTACAGAAAGAAATCATGAAATTTCTGGCTGTTCAAGGTCTGTTCACTGCATCTCTTGGATCTGAGGTTACTTCTTTTGAGTTGCAGGAAAAATTCAGGTGGCCAAAATCACCCACATCGAATGCTCTTTGCAAGATGTGTGTTGAACAGCTCCAGTTATTATTGGCAAATGCTCAGAAGGGAGAGGGGTCACGAGCTTCGGCTAGTAGCCTTGAGCCAAATGATCTTGGCCTGTACTTCATGAAGTTCTTCAGCACCCTATGCAATATTCCTTCAGTTTCCCTATTTCGTACCTTAGATGATGAGGATGATAAAGCAGTAAAAAAATTACAAGCAATTGAAGCAAAATTATCCAGAGAGGAAAGGAGCCATGGGCTTAGTGCTGAAGCTAATAGATTGCATGCACTGAGGTACTTGCTTATCCAATTGCTTCTGCAAGTGCTTCTTCAACCAGGGGAGTACTCAGAAGCTGCATCTGAACTCATCATCTGTTGTAAGAAAGCATTTTCTTCTTGTGATCTTCCTGACTCATCTGGAGATGATGATTTGGAGGCTGATGATGCACCAGAGTTGATGGATGTTCTTGTGGATACATTACTTTCACTGCTTCCACAGTCATCAGCTCCTATGCGATCTTCTATTGAGCAGGTATTCAAATACTTCTGTAATGATATTACCGATGATGGACTGATGCGGATGTTGCGGGTCATCAAGAAAAACTTAAAACCTGCTAGACATCCTGATGCAACAAGCGCAGAAGATAGCGATGGCGATGACGGCGATGACTTTATCAATATCGAAGAGGAAGATATTGATCAAGCTGAGACAGGTGAAACAGGTGAGACTGATGAGCAGACTGATGACTCAGATTCTGTTGTTGAGGCTGAGGAAAATGATCAGGGCCATCCTGAAGCTTCTGATGACTCTGATAGCGGAATGGATGATGATGCAATGTTCAGGATTGATACGTATCTGGCCCAGATTTTCAAGGAGAAGAAAAATCAGGCTGGAGGTGAAACTGCCCATTCCCAGCTTGTGTTGTTCAAACTTCGTATCCTTTCATTGTTGGAAATTTTCCTTCATGAAAATCCAGGTAAGCCTCAGGTTCTTATGGTGTACTCAAATTTGGCTCGAGCTTTTGTTAACCCACATACAGCAGAAGTTAGTGAGCAGCTTGGACAGCGTATTTGGGGTATATTACAAAGGCAAATATTTAAAGCCAAGGATTATCCAAGGGGTGAAGGGGTTCAACTATCAACTCTTGAACCTCTGTTGGAAAGAAATTTGAAATTGGCGTCAAAACCATTGAAGAAACAAAAGTCTGCATCAAATCCATCAAAGAAATCAGCTTCATGGAACCGACAGAAAATGGTTTCCTCCCTTGCCCAAACATCAACCTTTTGGCTTTTGAAGATTATTGATGCAAGAAACTTCTCAGAGTCCGAACTCCAGAGGGTGGTTGATATTTTTCAGGAAGTTTTGGCTGGGTATTTTGACAGTAAAAAGTCTCAAATCAAATCTGGGTTTTTAAAAGAAATATTCCGAAGAAGACCATGGATTGGGCATGCTGTTTTTGGATTTATTTTAGAGAGATGTGGAAGCTCCAAGTCAGACTTCCGACGAGTGGAGGCACTAGATTTGGTAATGGAAATATTGAAGTCATTGGTGACACTGAGTAGTGATAATCAGAATGCAGCCAAAAAGGTTCTTAAGAGCAATTTGGATAAGCTCTGCAATTTAATGAAAGATTTGGTGACAAATATGCCAAGCAAGCAAGCAAGGAGGTCAGAGGTACAGAAATTTTGTATAAAGACCTTTGAAATCTTGACTAAACTCAACCTCACCAAGTCTTTTATTAAAGCTCTGGCGCCTGATGTTCAAGCTGCTCTTGAGGCACAGCTTGGTGAGCAGTTCATTAATTTGAAGCAGCTGGGAAAATAA 3840 0.4326 MAAKKRNSSIDDEPVVEVPAAETNDSPKPPKKKTKKDKSNNDSDEPQEQVAAASDGSVKPMERKKKRKALDKERRRTAADTEPKLPEPSTSAAQAQPVDSPGTSSGGGSQLPEFHIGVFKDLAVAAEPAREAAAKQLVTELKAVQSAYDALDEKEVGDGGFKLEAEKDDGLDDCAPSVRYAVRRLIRGVSSSRECARQGFALGLTLLVGAVRKIRVESFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLTQEWTIDKNTSCIREFVSVIISLANKKRYLQEPAVSIILDLTEKLPVEALLNHVVEAPGMKEWFDAAMEVGNPDALLLALKLREKISIDNSAFVKLLPNPFSSSLLFSTDQLSSLSNCLKESTFCQPRVHGVWPVLVTILLPNTIMQEEDVAAASNSLKKHKKSRKSSSYDEETAKNLQSFCEIIIEGSLLLSSHDRKHLAFDVLFLLLQKLSASLVPIILSSKVVQCLMDILSTKNTWLYKVAQHFLKQLSDWVGDDDVRRVAVIVALQKHSNGKFDNITRTKAVKDFMSHFKTEAGCLLFVQSLMNLFVDEGSASEEPSDQSQTTDENSEIGSVDDKDSPRSNGNSDFLKSWIIESLPSILKHLKLGHEEKFRVQKEIMKFLAVQGLFTASLGSEVTSFELQEKFRWPKSPTSNALCKMCVEQLQLLLANAQKGEGSRASASSLEPNDLGLYFMKFFSTLCNIPSVSLFRTLDDEDDKAVKKLQAIEAKLSREERSHGLSAEANRLHALRYLLIQLLLQVLLQPGEYSEAASELIICCKKAFSSCDLPDSSGDDDLEADDAPELMDVLVDTLLSLLPQSSAPMRSSIEQVFKYFCNDITDDGLMRMLRVIKKNLKPARHPDATSAEDSDGDDGDDFINIEEEDIDQAETGETGETDEQTDDSDSVVEAEENDQGHPEASDDSDSGMDDDAMFRIDTYLAQIFKEKKNQAGGETAHSQLVLFKLRILSLLEIFLHENPGKPQVLMVYSNLARAFVNPHTAEVSEQLGQRIWGILQRQIFKAKDYPRGEGVQLSTLEPLLERNLKLASKPLKKQKSASNPSKKSASWNRQKMVSSLAQTSTFWLLKIIDARNFSESELQRVVDIFQEVLAGYFDSKKSQIKSGFLKEIFRRRPWIGHAVFGFILERCGSSKSDFRRVEALDLVMEILKSLVTLSSDNQNAAKKVLKSNLDKLCNLMKDLVTNMPSKQARRSEVQKFCIKTFEILTKLNLTKSFIKALAPDVQAALEAQLGEQFINLKQLGK* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0667 1279 Pfam DNA polymerase phi 180 993 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 877 896 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 87 110 - -
Ahy20g0667 1279 Coils Coil 134 154 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 1 112 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 26 44 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 902 927 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 902 947 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 1068 1087 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 574 603 - -
Ahy20g0667 1279 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 100 1276 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 928 947 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 1070 1087 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 58 82 - -
Ahy20g0667 1279 MobiDBLite consensus disorder prediction 575 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0667 Ahy-Chr20 7260856 7267117 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0667 K02331 - gmx:100787296 1893.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0667 20 7260856 7267117 Ahy20g0667 20 7260856 7267117 ECH
Ahy20g0667 20 7260856 7267117 Ahy10g0465 10 4589208 4595462 hybridization