Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0643 ATGTCAAGGAGGCTGGTAAATCCTTCGCGTCGGTTAGCTGATGCTGGAAGTATACCATTTGTGGCCTCTATTCAGTCCAAATCTCGCAACTCTCCCGTGCTATCTATCGGTCTTGTTGTTGTGGGTGCAATCCTTCTGATCGGTTATTGTTATAGCAATTCAGGGAATAGCAGTGATATCAAGGATGTAAGTAAACTTGAAGGTGGTGGCTCCTGCACAGCAGAAGTTCTACAGGCATTGCCCCTGTTGAAGAAAGCATACGGAGACAGTATGCACAAGGTTTTGCATGTCGGCCCTGAATCTTGTTCCGTGGTATCCAGTCTATATCAAGAAGAGGATACTGAGGCTTGGGGAATTGAACCATATGAGTTAGATGATGTCAGTTCGAAGTGCAAGAGTCTTGTACGCAAGGGCATTGTGCGTGTAGCTGACTTGAAGTTTCCTCTCCCTTACCGTGCAAAGTCATTTTCTCTTGTAATTGTGTCAGATGCATTGGACTACTTATCTCCAAGATACCTGAACAGAACCGTGCCAGAGTTGGTGAGGGTATCTGCTGATGGAGTTGTTATCTTCGCAGGTTATCCAGGTCAGCAGAGAGCTAGAGGTGGAGAAGTGGCCAAATTTGGTCGTCCAGCGAAACTGCGCAGCTCATCGTGGTGGATTAGGTTTTTTGTTCAGACAAGCTTGGAAGAGAATGAAACTGCTGGCAAAAAGTTTGAGCAGGCTTCAACCAAGAAAGGATACAAGCCAGGTTGCCAAGTATTTCACCTCAAATCATACGCTTGA 786 0.4593 MSRRLVNPSRRLADAGSIPFVASIQSKSRNSPVLSIGLVVVGAILLIGYCYSNSGNSSDIKDVSKLEGGGSCTAEVLQALPLLKKAYGDSMHKVLHVGPESCSVVSSLYQEEDTEAWGIEPYELDDVSSKCKSLVRKGIVRVADLKFPLPYRAKSFSLVIVSDALDYLSPRYLNRTVPELVRVSADGVVIFAGYPGQQRARGGEVAKFGRPAKLRSSSWWIRFFVQTSLEENETAGKKFEQASTKKGYKPGCQVFHLKSYA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0643 261 Gene3D Vaccinia Virus protein VP39 71 246 IPR029063 -
Ahy20g0643 261 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 260 - -
Ahy20g0643 261 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 260 IPR044689 GO:0008168|GO:0045488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0643 Ahy-Chr20 6996318 7000020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0643 K23871 - gmx:100800870 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0643 20 6996318 7000020 Ahy20g0643 20 6996318 7000020 ECH
Ahy20g0643 20 6996318 7000020 Ahy10g0440 10 4316393 4324598 hybridization