Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g0640 ATGAATGTGAATGTTATCTTATTAGCCCTTATTTTTTTCTTCTTCATGTGGACAATATGTTTTGCCCAAAATACCCCTGAAGACTTCCTTTCAGTTCACAATGAGGCTCGTGAAGAGGTTGGTGTGGGTCCACTCTCATGGAACCACACACTTGAAGCCTACGCTCAGCGCTACGCCAACGAGAGGATCCCGGACTGCAACCTGGAACACTCCATGGGGCCTTACGGCGAGAACATCGCCGAAGGCTACGGCGACATGAAGGGCTCTGACGCCGTGAAGTTTTGGTTGACGGAGAAGCCAAATTATGACTACCACTCAAACTCATGCGTTAACGATGAGTGCCTGCATTACACTCAGATAGTGTGGCGTGATTCGGTTCATGTTGGGTGCGCAAGAGCTAAGTGTAACAACCATTGGGAGTTCGTTATCTGCAGCTATGACCCACCCGGCAACATTGAAGGCCAACGTCCCTATTGA 477 0.4906 MNVNVILLALIFFFFMWTICFAQNTPEDFLSVHNEAREEVGVGPLSWNHTLEAYAQRYANERIPDCNLEHSMGPYGENIAEGYGDMKGSDAVKFWLTEKPNYDYHSNSCVNDECLHYTQIVWRDSVHVGCARAKCNNHWEFVICSYDPPGNIEGQRPY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g0640 158 CDD CAP_PR-1 26 158 - -
Ahy20g0640 158 PANTHER - 4 158 - -
Ahy20g0640 158 ProSitePatterns CRISP family signature 2. 141 152 IPR018244 GO:0005576
Ahy20g0640 158 Pfam Cysteine-rich secretory protein family 30 146 IPR014044 -
Ahy20g0640 158 SMART SCP_3 24 154 IPR014044 -
Ahy20g0640 158 SUPERFAMILY PR-1-like 10 158 IPR035940 -
Ahy20g0640 158 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 4 158 IPR001283 -
Ahy20g0640 158 Gene3D CAP 24 158 IPR035940 -
Ahy20g0640 158 PRINTS Allergen V5/Tpx-1 family signature 91 104 IPR001283 -
Ahy20g0640 158 PRINTS Allergen V5/Tpx-1 family signature 141 154 IPR001283 -
Ahy20g0640 158 PRINTS Allergen V5/Tpx-1 family signature 45 63 IPR001283 -
Ahy20g0640 158 PRINTS Allergen V5/Tpx-1 family signature 114 130 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g0640 Ahy-Chr20 6962197 6963207 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g0640 K13449 - gmx:100527778 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0640 20 6962197 6963207 Ahy20g0640 20 6962197 6963207 ECH
Ahy20g0640 20 6962197 6963207 Ahy10g0439 10 4307218 4307887 hybridization