Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2971 ATGGGATCGGCGGGGGAGTGGCTGGAGAAGGCGCTGGTGGAATTGTGTTCGAAGATAGAGACGGGATTGGGTTTGGGTTTGGATGAAGAGATTATAAAGGGACTTGTTTCTTACTGTGACCTTGCTGAGCCTCGCGATGCTAAGGAGTACCTTGATAATATAATTGGTCAGGAAGCCGGGAAGCCTGTGATTGAAGAATATTTAAGACGGAGGGGTCACTTAGAACTCACAACCAAATCCAATGTTCCAACTGCCCAATTGCATGCCTATGTCAAACCTTCAGTTGAGGCATCTGCAGGGGGAAGTAAGAAATCATCGAGAGCACCAAAAGCAGTTACAGTCCAAAGAAGTAATGCCGAACCCATCAAGAATGCAGTTCCCAGCAATCAGAAAAATCAGGTTCCAACTTCAGGCGGTGAATCGAGTACATCACAGAAAGGAAACCAAGGGAATTCCAAAAAGAAGAAGGCTGGGAAAGCCATTTCGCTTGCCGAGGCAGCCAAAGGGTCAATTGTGTTTCAGCAGGGAAGACCATGCTCTTGTCAAGCTCGTCGTCACAGGCTGGTCAGCAATTGCTTATCATGTGGCAAAATAGTTTGTGAACAAGAAGGAGAGGGGCCTTGCCATTTCTGCGGCGCACTTGTGTTGAAAGAGGGCAGCTCGTACGCTGGTCTGGAAGAAACATTGCCCCCTTTATCGAATACCGAAGCTGCTGCTGAAGCTTATGCAAAGAGGCTTGTCGAATATGATCGAAATGCTACTGCTCGTACAACTGTTATCGATGACCAAAGTGACTATTATGAGATTGATGGAAACAGTTGGTTGTCAAAGGAGGAGAAAGAGATGTTGAAGAAGAAACAAGAGGAGATGGAAGAAGCTGAACGAGCCAAACGGAATAAAGTGGTTGTGACTTTTGATCTGGTTGGACGCAAGGTTCTTCTGAATGAAGATGAAGTTTCAGAACTAGAGTCTGACAATAGAATACTACGTCCACCAAATGAAAAGGAAGTGAACCGTATCAGACCAAATCCAAGTCTTAGAGTACAGCCCATTTTTGTAGACCTAGGATTCACTAAGAAGCATACAAAAGATAGGCAAACAAACAAAGGCGTAAGCAACAGTTTGTGCCTGGAGATTACTGGGAGGGTGCAACATGAAAGCAATGACATGAAGTATTTTATGATGGACAACCAATTGGCAGCAGCAGCTTCAAGTGAAAAATTTTGGAAAGCATCTTCTGCAAATGGAGTATACGATGGTGATGATGGTGAATGTTTTAGGAGTAACCAATGA 1293 0.4462 MGSAGEWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCDLAEPRDAKEYLDNIIGQEAGKPVIEEYLRRRGHLELTTKSNVPTAQLHAYVKPSVEASAGGSKKSSRAPKAVTVQRSNAEPIKNAVPSNQKNQVPTSGGESSTSQKGNQGNSKKKKAGKAISLAEAAKGSIVFQQGRPCSCQARRHRLVSNCLSCGKIVCEQEGEGPCHFCGALVLKEGSSYAGLEETLPPLSNTEAAAEAYAKRLVEYDRNATARTTVIDDQSDYYEIDGNSWLSKEEKEMLKKKQEEMEEAERAKRNKVVVTFDLVGRKVLLNEDEVSELESDNRILRPPNEKEVNRIRPNPSLRVQPIFVDLGFTKKHTKDRQTNKGVSNSLCLEITGRVQHESNDMKYFMMDNQLAAAASSEKFWKASSANGVYDGDDGECFRSNQ* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2971 430 MobiDBLite consensus disorder prediction 108 151 - -
Ahy1g2971 430 Pfam Putative zinc finger motif, C2HC5-type 177 217 IPR009349 GO:0005634|GO:0006355|GO:0008270
Ahy1g2971 430 PANTHER TRANSCRIPTION REGULATOR/ ZINC ION BINDING PROTEIN 3 427 - -
Ahy1g2971 430 Coils Coil 232 252 - -
Ahy1g2971 430 MobiDBLite consensus disorder prediction 96 160 - -
Ahy1g2971 430 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 3 427 IPR039128 -
Ahy1g2971 430 Coils Coil 276 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2971 Ahy-Chr1 111282955 111285874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2971 K23398 - gmx:100810833 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1895 11 124069012 124071921 Ahy1g2971 1 111282955 111285874 hybridization