Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2958 ATGAACTCCATGGCTCTAAAATCTTTCGTTGGACTCCGACAATCCTCCTTGGAAACCACCCCTTTCACCGTCCACCAGAAGCCCGCCACCATCAACCACCCCCAGAAGCTCAAGGTCATTGCCGGAAAAACCAGTCCCAAGCTCCAAGGCCGGAACCTCCGCGTTGCAATCGTCGGCGGAGGCCCTGCGGGGGGCTCTGCCGCGGAGACCCTAGCAAAGGGAGGCATCGAAACGTTCCTAATAGAACGGAAAATGGATAACTGCAAGCCGTGCGGGGGCGCCATTCCGCTGTGCATGGTGGGGGAGTTCGAGCTGCCATTAGACATCATCGACCGGCGCGTGACGAAGATGAAGATGATATCGCCGTCGAATGTCGCGGTGGACATTGGAAGGACCTTGAAGCCGCACGAGTACATCGGAATGGTGAGACGTGAGGTTTTGGACGCGTACCTTAGAGATAGGGCAAAAGAGAACGGTGCCACCATTATCAACGGATTGTTCTTGAAGATGGATATGCCTAAAGATAAGAACTCACCTTATTTGCTGCATTATTCTGGGTATGATGGTAAAACCGGTGGGATTGGTGAGAAGAGAACACTGGAGGTCGATGCTGTCATTGGTGCCGATGGGGCTAATTCTAGAGTTGCTAAGGCCATTGATGCTGGTGACTATGAATATGCCATTGCATTTCAGGAGAGGATAAAGATCCCGGATGATAAAATGGTGTATTATGAAAATCTTGCGGAGATGTACGTCGGGGATGATGTATCCCCAGATTTCTACGGTTGGGTGTTTCCAAAATGCGACCATGTTGCCGTTGGGACAGGTACAGTGACACACAAATCAGACATCAAAAAATTCCAGCTGGCAACACGAAAAAGAGCAGAGGACAAGATCACTGGAGGCAAGATCATCCGAGTGGAGGCGCATCCCATTCCCGAACACCCCCGCCCCCGAAGATTATCGGGGAGGGTGGCCCTTGTGGGGGATGCAGCCGGCTATGTGACAAAATGCTCCGGGGAAGGGATCTATTTCGCGGCGAAGAGTGGGAGAATGTGCGCGGAGGCCATTGTGGAAGGATCGGAGAATGGAAAGAGGATGGTGGATGAAGGGGATTTGAGGAAGTACTTGGAGAAGTGGGACAAGACATATTGGCCGACGTATAAGGTGTTGGATGTGCTTCAGAAGGTGTTTTATAGGTCGAATCCGGCGAGGGAGGCGTTTGTGGAGATGTGTGCTGATGAATATGTTCAGAAGATGACATTTGATAGCTATTTGTATAAGACAGTAGTGCCTGGAAATCCATTGGAGGATATCAAGTTGGCCATTAACACCATTGGGAGCTTGGTCAGAGCCAATGCTATCAGGAAGGAAATGGACAAACTCAATGTATGA 1395 0.5068 MNSMALKSFVGLRQSSLETTPFTVHQKPATINHPQKLKVIAGKTSPKLQGRNLRVAIVGGGPAGGSAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFELPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDAYLRDRAKENGATIINGLFLKMDMPKDKNSPYLLHYSGYDGKTGGIGEKRTLEVDAVIGADGANSRVAKAIDAGDYEYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKSDIKKFQLATRKRAEDKITGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDIKLAINTIGSLVRANAIRKEMDKLNV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2958 464 TIGRFAM GG-red-SF: geranylgeranyl reductase family 55 357 IPR011777 GO:0016628
Ahy1g2958 464 TIGRFAM BchP-ChlP: geranylgeranyl reductase 54 451 IPR010253 GO:0015979|GO:0015995|GO:0045550
Ahy1g2958 464 Gene3D - 52 463 IPR036188 -
Ahy1g2958 464 TIGRFAM ChlP: geranylgeranyl reductase 53 451 IPR011774 GO:0045550
Ahy1g2958 464 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 24 463 - -
Ahy1g2958 464 PANTHER OS01G0265000 PROTEIN 24 463 - -
Ahy1g2958 464 Pfam Pyridine nucleotide-disulphide oxidoreductase 54 223 IPR023753 GO:0016491
Ahy1g2958 464 SUPERFAMILY FAD/NAD(P)-binding domain 53 435 IPR036188 -
Ahy1g2958 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 - -
Ahy1g2958 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 201 216 - -
Ahy1g2958 464 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 54 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2958 Ahy-Chr1 111119099 111121155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2958 K10960 - gmx:100814603 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1912 11 124521732 124523783 Ahy1g2958 1 111119099 111121155 hybridization