Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2954 ATGAGTTCTTCTTCTAGGAGTGACAATAACAGAGAAGAAGTAGAAGAAAGGAGAAGAAGACGAAGCAGCCCAAGCAAGTCGCCCATAAGGGACCGATCCAAAACGACTTCTTCCAAGTTGTCGTCTCGCTCCTCAACACTCACCCGTTCCGGGCTCGACGATGACCTCGTAGCTGACTTTGAAGACCTTCGAATCTCTTCGGACCCTAACCCTAACCCTAGAAGCTTCCCTTACAGCGTGAAGCAGCAATGCTGGGAGAAAGCCGAGAAGATCAAAGGCCGAGACCCCGATCGCTGGCGCAGGGATGCCCTCGGCAACACCGTCTTTCGCAAGCTCGTCGGTTGCCCTGGTTGTCTCTGCCATGATTACGACCACATCCTCCCTTACTCTAAGGGTGGGAAAAGCACACTGGAAAACTGTCAAGTTTTACAGGCAACAGTTAACCGATCGAAGGGTAATCGAACAGATATATCCAAATCTGAACTTATTCAGAAGAGTTCTTATTGCAGGGTTTCAGGTCGCGATATGGATCTTTTGGAACTGTCAGCATATGGCAACGTACGGCGAGGACCGGAGTCTGGGGGTTGTAGAATCCAATGA 600 0.5017 MSSSSRSDNNREEVEERRRRRSSPSKSPIRDRSKTTSSKLSSRSSTLTRSGLDDDLVADFEDLRISSDPNPNPRSFPYSVKQQCWEKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTDISKSELIQKSSYCRVSGRDMDLLELSAYGNVRRGPESGGCRIQ* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2954 199 CDD HNHc 108 152 IPR003615 -
Ahy1g2954 199 Pfam HNH endonuclease 121 154 IPR002711 GO:0003676|GO:0004519
Ahy1g2954 199 PANTHER HNH ENDONUCLEASE 16 199 - -
Ahy1g2954 199 MobiDBLite consensus disorder prediction 8 37 - -
Ahy1g2954 199 Gene3D - 79 173 - -
Ahy1g2954 199 MobiDBLite consensus disorder prediction 1 49 - -
Ahy1g2954 199 PANTHER HNH ENDONUCLEASE 16 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2954 Ahy-Chr1 111033606 111036097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2954 - - gmx:100500174 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1916 11 124641836 124644343 Ahy1g2954 1 111033606 111036097 hybridization