Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2939 ATGGGCCAAGAGAACCTCTCAGCTCACAAGAGAAGCAGCGCCGCCAACGCTCTTCCAACCACCAACGGCCGAGCACGCTCCGCCCCCCGTGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACCATCCTCTGCGGTTTCGTCACCATCCTTGTCCTTCGCGGCACCATCGGCGTCAACCTCTCCTCCTCCGACGCTGATGCCGTCAACCAGAGCCTCATCGAGGAGACCAACCGCATTCTCGCTGAGATCCGCTCCGACTCCGACCCCGACGACAACGACACCCCTTTCAGCCCCAACGACACCGCCGCCTTCTCCCTAGGCCCCAAGATCTCCGATTGGGATCAACAACGCCACCAATGGCTCCAGCAAAACCCTGAATACCCTAATTTCGTGAGAGGTAAAGCTCGAATCTTGCTCCTCACTGGTTCACCTCCAAAACCCTGTGACAACCCAATTGGTGATCATTACTTGTTGAAGTCGATTAAGAACAAAATTGATTACTGTAGATTGCACGGGATTGAGATTGTGTACAATTTGGCGCATTTGGATAAGGAACTTGCTGGGTATTGGGCCAAATTGCCAATGATTAGAAGGTTGATGTTCTCACACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTCTTCACTGACATGGTTTTTGAGCTTCCTTTGTCTAAGTATGATGATTACAATTTGGTACTTCATGGTTACCCTGATTTGTTGTTTGAGCAGAAGTCTTGGATTGCTGTGAATACCGGCAGCTTCTTGTTTCGGAATTGCCAGTGGTCTTTAGATTTGCTTGATGATTGGGCTCCCATGGGCCCCAAGGGTCTAGTGAGGGAGGAGGCTGGTAAGGTCTTAACTGCAAATTTGAAGGGTCGCCCGGCATTTGAGGCCGATGATCAATCTGCATTGATATACCTTTTGTTGTCCAAAAAGGAGAAGTGGATGGATAAGGTTTTCCTTGAGAATTCTTACTACCTGCACGGTTACTGGGCTGGCTTGGTTGACCGGTATGAAGAGATGGTTGAGAAGTACCATCCCGGATTAGGAGATGAGAGGTGGCCTTTCGTGACACATTTTGTGGGATGTAAACCTTGTGGGAGCTATGGAGATTATCCTGTTGAGAGGTGCCTCAGTAGTATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTCAAGCTCTATGGTTTCCGTCACCGTGGCTTGTTGAGCCCTAAGATCAAGAGAATAAGAAATGAGACAGTTACTCCTTTGGAGTATGTAGATCAGTTTGATATCAGAAGACATTCTACAGTGAGCAGTGAATCAAAAAGCCAGTGA 1344 0.4881 MGQENLSAHKRSSAANALPTTNGRARSAPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLSSSDADAVNQSLIEETNRILAEIRSDSDPDDNDTPFSPNDTAAFSLGPKISDWDQQRHQWLQQNPEYPNFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDKELAGYWAKLPMIRRLMFSHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGLVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMVEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEYVDQFDIRRHSTVSSESKSQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2939 447 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 280 IPR029044 -
Ahy1g2939 447 MobiDBLite consensus disorder prediction 1 31 - -
Ahy1g2939 447 Pfam galactosyl transferase GMA12/MNN10 family 137 375 IPR008630 GO:0016021|GO:0016757
Ahy1g2939 447 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 9 440 IPR008630 GO:0016021|GO:0016757
Ahy1g2939 447 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 9 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2939 Ahy-Chr1 110804353 110806247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2939 1 446 Glycosyltransferase AT5G07720 77.243 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2939 K08238 - gmx:100793238 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1941 11 125425638 125427519 Ahy1g2939 1 110804353 110806247 hybridization