Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2894 ATGTGGTTGAGAAAAGTTCTGACCAGTTATTGGTTCATATGTATATATGTTCATTCAGCGAAGGAACAACAAAGAGTGGACTTGACTTCAAGGGCCATTTCCATGGCTAACCCAACCAGTAAGCAAAACCCAACAACGAACAGCTGTTTTTCTCTTGTGATATTTCTATTGTTTGTTATTGGATGCACTGCAAGGCCTATTTATCCACTTCCTAGTCAAGATGATTATAGAATTCGGCAGCCTCTACAAACTTTCCGGCCATACAACATTGCGCACCGAGGCGCAAATGGAGTGATTCCTGAAGAAACTCGTCCTGCATACTTGAAAGCTATTGAAGATGGTGCAGACTTCATTGAAACTGATATCTTATCTTCCAAAGATGGTGTTCTTATATGTTTCCACGATGTTACCCTTGATAATACCACTGACATTGCGAAGTACAAAAAGTTTGAAAATCGTAAAAGGACATACGAAGTCGAAGGGGTCAACCGCACTGGATTTTTTACTGTTGATTTCACAATTGAGGAATTAAAGTCATTAAGGGTGAATCAGAGGTATAGCTTCAGGGATAAACAGTATAATGGAAAATTTGGAATCATCACTTTCGAAGAGTTCATTTCCATTGCATTGGATGCAGATAGAGTTGTTGGAATATATCCAGAGATAAAGAATCCAGTTTTTATCAATCAGCATGTGAAATGGCCAAATGGCAAAAGATTTGAAGACATATTTGTCAAGACACTTCAGAAATATGGATACAAGGGTTCATACTTGTCAAAAGACTGGCTAAAACAACCTGTATTTATTCAGTCATTTGCTCCAACATCACTTGTGTATATATCAAATCAAACGGATTTGCCCAAGGTTTTCTTAATTGATGATGTTACTGTTTCGACGCAAGACACTAATCAGTCATATTGGGAAATCACATCCGATAAATACCTAAACTACATAAAGAATTACGTTGTTGGAATTGGACCTTGGAAGGACACAATAGTACCTGTGGCAAAGAATTATTTGGAAGAGCCTAGTGATCTTGTTGCCAGGGCACATGCTCATAACCTTCAGGTGCATCCATATACTTACCGAAATGAGAACCAGTTTTTGCACTTCAACTTTAGTCAAGATCCTTATAAAGAGTATGATTATTGGATCAACAAAATAGGAGTTGATGGCCTCTTCACAGATTTCACAGGAAGTCTTCACAATTTTCAGGAATGGACCTCCAGTGATACAAAGACTGAATCCAATATATTGCATAAAATTGCTCTTTTGGTCTCTCCTTATAATAACTAA 1296 0.3758 MWLRKVLTSYWFICIYVHSAKEQQRVDLTSRAISMANPTSKQNPTTNSCFSLVIFLLFVIGCTARPIYPLPSQDDYRIRQPLQTFRPYNIAHRGANGVIPEETRPAYLKAIEDGADFIETDILSSKDGVLICFHDVTLDNTTDIAKYKKFENRKRTYEVEGVNRTGFFTVDFTIEELKSLRVNQRYSFRDKQYNGKFGIITFEEFISIALDADRVVGIYPEIKNPVFINQHVKWPNGKRFEDIFVKTLQKYGYKGSYLSKDWLKQPVFIQSFAPTSLVYISNQTDLPKVFLIDDVTVSTQDTNQSYWEITSDKYLNYIKNYVVGIGPWKDTIVPVAKNYLEEPSDLVARAHAHNLQVHPYTYRNENQFLHFNFSQDPYKEYDYWINKIGVDGLFTDFTGSLHNFQEWTSSDTKTESNILHKIALLVSPYNN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2894 431 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 52 430 - -
Ahy1g2894 431 Gene3D Phosphatidylinositol (PI) phosphodiesterase 85 404 IPR017946 GO:0006629|GO:0008081
Ahy1g2894 431 SUPERFAMILY PLC-like phosphodiesterases 87 403 IPR017946 GO:0006629|GO:0008081
Ahy1g2894 431 Pfam Glycerophosphoryl diester phosphodiesterase family 92 399 IPR030395 GO:0006629|GO:0008081
Ahy1g2894 431 ProSiteProfiles GP-PDE domain profile. 87 405 IPR030395 GO:0006629|GO:0008081
Ahy1g2894 431 PANTHER OS01G0763600 PROTEIN 52 430 - -
Ahy1g2894 431 CDD GDPD_ScGlpQ1_like 87 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2894 Ahy-Chr1 109900958 109905401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2894 49 429 Acyl Lipid Metabolism Gene Families AT1G74210 71.094 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2894 K01126 - gmx:100778145 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2022 11 128526092 128530396 Ahy1g2894 1 109900958 109905401 hybridization