Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2886 ATGCAGAGCTTTCTTTGCAAATTGGTCGCAAATCACAGCCACCGCCACCACCACAACCTCTCCGGCACTCTCCACCGCAACATATTGCACTCTCTCTCAAAACCTCCTCTTTCTTCACAACCACAACAACAACTCGTACTTCAACTACGCAACCGCATTCCCACCACCTCTTTCTTCGCTACTCTCCCACTTCACCATTCTCACTCATGCCGCTCCTTTCTTACCCAAATTCGAGGGTTTCTCTCCAACCCGCTTCTTGCCTCCAATTTCCGCAGATTCTCCAACAGAAACCAGCTCCTCAATTTCAGGTCCAAGCTCCCCACACCTCAATTTCACCGCCGCAGCTTCGGCTTCAACCAATCTCCTGATCTTTACCGTGGCTGGAGATCATGGTTCAACAGGCTAACACCTAATGATATGGTTCTAGGATTGATTATAGCTAATGTTGCTGTTTTTTTATTATGGAGGATAGGAGATAAAAAGTTTATGATAAATAACTTTACTATCTCCCTGGACAATTTCAAGAGTGGACGTTTCCACACTTTGATAACCAATGCATTCAGTCACATAGAATTTGGGCATCTGTTTTCCAATATGATTGGACTCTACTTCTTTGGATTGAATGTTGCAGGAAATTTTGGCCCTGCATATTTGCTGAAGCTATATCTTACTGGGGCAGTTGGTGGTTCCATTTTTTACTTGGTGCATAAAGCCTATAAGTCACAAACATCAAAGGACTGGGGATTTATGAAGCATTCAAGGGATATAGCATTGGGGGCAAGTGCAGCTGTAAATGCAATTGTGCTGCTTGATATATTCCTCTTTCCCAAAGCAACCATTTACTTGAACTTCCTTATACCAGTTCCTGCAATCCTATTGGGCGCACTCTATATCGGAAAAGATATGCTAATCATGTTCCAGGGAGACAGTTACGTAGCAGGATCTGCACATTTGGGGGGTGCTGTAGTTGCAGCCATTGCTTGGGCAAGAATTCGAAAAGGCATATTCTAA 1011 0.4392 MQSFLCKLVANHSHRHHHNLSGTLHRNILHSLSKPPLSSQPQQQLVLQLRNRIPTTSFFATLPLHHSHSCRSFLTQIRGFLSNPLLASNFRRFSNRNQLLNFRSKLPTPQFHRRSFGFNQSPDLYRGWRSWFNRLTPNDMVLGLIIANVAVFLLWRIGDKKFMINNFTISLDNFKSGRFHTLITNAFSHIEFGHLFSNMIGLYFFGLNVAGNFGPAYLLKLYLTGAVGGSIFYLVHKAYKSQTSKDWGFMKHSRDIALGASAAVNAIVLLDIFLFPKATIYLNFLIPVPAILLGALYIGKDMLIMFQGDSYVAGSAHLGGAVVAAIAWARIRKGIF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2886 336 SUPERFAMILY Rhomboid-like 138 332 IPR035952 -
Ahy1g2886 336 Pfam Rhomboid family 175 330 IPR022764 GO:0004252|GO:0016021
Ahy1g2886 336 Gene3D - 136 334 IPR035952 -
Ahy1g2886 336 PANTHER RHOMBOID-LIKE PROTEIN 12, MITOCHONDRIAL 20 330 - -
Ahy1g2886 336 PANTHER RHOMBOID PROTEASE 20 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2886 Ahy-Chr1 109681014 109685896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2886 - - gmx:100819148 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2036 11 129556248 129561066 Ahy1g2886 1 109681014 109685896 hybridization