Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2871 ATGGGTTGGGCTATAGCTGTGCATGGCGGCGCCGGCGACATCTCCCGTTCACTGCCACATGACCGCCGCCAGCCCCGTGAGGAAGCCATCCGCCACTGCCTTCAAATTGGCGTCGAAGCTCTTCAATCCAATTCGCCTCCTTTGGACGTGGTTGAGCTCGTGGTTCGTGAATTGGAGAATATTCCGCACTTCAATGCTGGTAGGGGTTCTGTGTTGACCTCCGAAGGCACAGTTGAAATGGAAGCTTCGATCATGGATGGCAACACTATGAGATGTGGTGCTGTTTCTGGTTTAACCACGGTTGTTAACGCCGTCTCTTTGGCTCGTCTTGTTATGGAGAAGACTCCTCATATATATCTTGCATTTGATGGAGCAGAGCAATTTGCAAGAGAACAAGGTGTTGAGATAGTAGATTCAAGCCATTTCATTACTCCTGAAAATGTTGAGAGACTGAAGCTAGCAAAAGAAGCCAATAGGGTCCAGATTGATTATAACGCCCAACCCATCCAAAATGATACTAAGAAGGAAAAGCCGTGTGCTAATGGGGATAGCCAAATTGGGACTGTTGGGTGTGTGGCTGTTGACAGTAATGGTAATCTAGCTTCTGCTACATCTACTGGAGGATTAGTGAACAAAATGGCTGGCAGAATCGGTGACACACCTGTCATAGGTGCCGGGACTTATGCCAATGAGCTTTGTGCAGTTTCAGCAACAGGTAAAGGTGAATCAATAATACGTGGGACGGTTGCAAGAGACGTGGCTGCCCTGATGGAGTTCAAAGGCCTCTCTCTCAAGGAAGCTGCTGATTGTGTTGTGCACGAGCGCACACCAAAGGGCACCGTTGGTTTGATCGCTGTGTCTGCTGCAGGAGAAGTTGTGATGTCTTTTAACACAACAGGCATGTTCCGTGGATGTGCTACCGAAGATGGCTACTCAGAGGTTGCTATTTGGTCTGATGCCCAAGTTGAGTAA 972 0.4866 MGWAIAVHGGAGDISRSLPHDRRQPREEAIRHCLQIGVEALQSNSPPLDVVELVVRELENIPHFNAGRGSVLTSEGTVEMEASIMDGNTMRCGAVSGLTTVVNAVSLARLVMEKTPHIYLAFDGAEQFAREQGVEIVDSSHFITPENVERLKLAKEANRVQIDYNAQPIQNDTKKEKPCANGDSQIGTVGCVAVDSNGNLASATSTGGLVNKMAGRIGDTPVIGAGTYANELCAVSATGKGESIIRGTVARDVAALMEFKGLSLKEAADCVVHERTPKGTVGLIAVSAAGEVVMSFNTTGMFRGCATEDGYSEVAIWSDAQVE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2871 323 Pfam Asparaginase 3 317 IPR000246 GO:0016787
Ahy1g2871 323 CDD Asparaginase_2 4 310 - -
Ahy1g2871 323 PANTHER L-ASPARAGINASE 1 317 IPR000246 GO:0016787
Ahy1g2871 323 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 317 - -
Ahy1g2871 323 Gene3D (Glycosyl)asparaginase 188 320 - -
Ahy1g2871 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 317 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2871 Ahy-Chr1 109384268 109386156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2871 5 294 Miscellaneous Gene Families AT4G00590 27.469 2.05e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2871 K13051 - gmx:100799400 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2055 11 130323968 130325877 Ahy1g2871 1 109384268 109386156 hybridization