Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2846 ATGCCTACCATCAGTGTGGGGCGGGATCGCCTGTTTGCGGCTCTAGGAAGAACCTACACGCAAGAGGAATTCGAAGACTTGTGCTTCAGCTTTGGGATCGAGCTGGATGACGTCACGACGGAGAAGGCGATTGTGAGGAAAGAGAGGCATTTGGAAGCAGAAGAAGATGCTGACGAGGATGAAGAAGTCATCTACAAAATTGAAGTTCCCGCCAATAGATATGATTTGTTGTGCCTTGAAGGGCTTGCACAGGCCCTTCGAGTATTCTGTGAGTGTCAGCAGATCCCCACTTACAAATTGGCAGATGTTAGTAAAGATGCAATGCTCAAAATGCATGTTAAGCCTGAGACATCTCAGATTCGTCCATACATTGTGTGTGCCGTGTTAAGAGGTATTACTTTTGATAAAGCAAGATACAACAGCTTTATCGATCTCCAAGACAAGCTTCACCAAAACATTTGTAGGAGAAGAACCCTTGTTGCTATTGGCACTCATGATCTGGATACATTGAAAGGACCTTTCACCTATGAGGCTTTACCACCGTCAAGTGTAAATTTTACCCCGCTGAAGCAGGAAAGGAGCTTCAGGGCTGATGAGCTGATGGAGTTCTACAAATCAGATTTGAAGCTGAAGAAATTCTTGCATATAATTGAGGACTCCCCTGTTTTTCCTGTTATATATGACCGTAACAGAACTGTTTTATCTTTGCCTCCAATTATCAACGGTGCACATTCGGCCATCACTCTGGAGACAAAGAATGTATTTATTGAATGTACTGCTACTGACTTAACAAAGGCAAAGATTGTTTTAAACACAATGGTCACAACCTTCTCGGAATATTGTGCAAATAAGTTTGTCATTGAACCAGTAGAAGTGGTTTATCCTGATGGAAAGTCACATATATACCCCGACTTATCCATCTATAATATGGAGGTTTCTCTACCTTACGTCAATGGATTAATTGGGGTATCCTTGGAAGCAGAAGAGGTCACTAAGCTCTTAAATAGGATGCAATTGCATGCCAAACAGTCTACATCTGATAATAAGCAGGCTAAATTTGTTGTATCTGTACCCCCTACTAGAAGTGATATTCTTCACCCGTGTGATGTTATGGAGGATGTTGCAATTGCTTATGGATTCAATGCTATCAAGGATAAAGCAATAGTAGATAATAAGGGCTCAAAGAGATTGGCTGCTTCATTGAAGCTACTTCCTCTGAATGAGCTTAGTGATCTGATCAGAAAAGAGGTGGCAATGGTTGGGTTCACAGAGGTCTTGACATTTATACTTTGCTCGAAAAAGGAAAACTTTGCCATGCTAAACCGCAAAGATGATACATCAAAAGCAGTTATCATTGGAAACCCTAGGTCTTCAGACTTTGAGGCTGTACGGACCAGTCTTATGCCTGGCATCTTGAAAACTGTGGCTCATAACAAGGATCATCCAAAGCCCATAAAGATTTTTGAAGTAGGGGATATATCAGTTTTAGATGACAACAATGACGTTGGTGCAAAAAATCTTCGCCAACTTGCTGCACTATACTGCGGTGCTAATGCAGGATTTGAGGTTGTTCATGGTTTGGTGGACAGAGTAATGGAAAAGAATGGGGTTCCCTTTGTTTCATCCGGTGATAAATCAGGTTACTATATTGAGCGATCAGATGAGCCTGAGTTTCTTGCGGGTAGACAAGCTAGAATCATTTACAAGGGAAAGCACATTGGCACTTTTGGCATTGTCCACCCAGAGGCACTGTTCCTTTTGAAACTGGGAATCAATAAGTTCAAGTGCTTCAGTGACATCAGCTTCTTACACTTGCTTGATGGGGAACTGAGTTTGGCTTGCTGA 1845 0.4206 MPTISVGRDRLFAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKERHLEAEEDADEDEEVIYKIEVPANRYDLLCLEGLAQALRVFCECQQIPTYKLADVSKDAMLKMHVKPETSQIRPYIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLKGPFTYEALPPSSVNFTPLKQERSFRADELMEFYKSDLKLKKFLHIIEDSPVFPVIYDRNRTVLSLPPIINGAHSAITLETKNVFIECTATDLTKAKIVLNTMVTTFSEYCANKFVIEPVEVVYPDGKSHIYPDLSIYNMEVSLPYVNGLIGVSLEAEEVTKLLNRMQLHAKQSTSDNKQAKFVVSVPPTRSDILHPCDVMEDVAIAYGFNAIKDKAIVDNKGSKRLAASLKLLPLNELSDLIRKEVAMVGFTEVLTFILCSKKENFAMLNRKDDTSKAVIIGNPRSSDFEAVRTSLMPGILKTVAHNKDHPKPIKIFEVGDISVLDDNNDVGAKNLRQLAALYCGANAGFEVVHGLVDRVMEKNGVPFVSSGDKSGYYIERSDEPEFLAGRQARIIYKGKHIGTFGIVHPEALFLLKLGINKFKCFSDISFLHLLDGELSLAC* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2846 614 SUPERFAMILY PheT/TilS domain 221 281 - -
Ahy1g2846 614 Pfam Phenylalanyl tRNA synthetase beta chain CLM domain 405 584 IPR041616 -
Ahy1g2846 614 Gene3D - 1 90 - -
Ahy1g2846 614 TIGRFAM pheT_arch: phenylalanine--tRNA ligase, beta subunit 1 585 IPR004531 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Ahy1g2846 614 Gene3D - 308 383 - -
Ahy1g2846 614 SMART B3_4_2 120 282 IPR005146 GO:0003723|GO:0004826
Ahy1g2846 614 Pfam tRNA synthetase B5 domain 310 380 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Ahy1g2846 614 SUPERFAMILY Putative DNA-binding domain 4 96 IPR009061 -
Ahy1g2846 614 Pfam B3/4 domain 121 281 IPR005146 GO:0003723|GO:0004826
Ahy1g2846 614 ProSiteProfiles B5 domain profile. 305 385 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Ahy1g2846 614 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 1 584 - -
Ahy1g2846 614 CDD PheRS_beta_core 405 584 IPR041616 -
Ahy1g2846 614 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 1 584 IPR045060 GO:0004826|GO:0006432
Ahy1g2846 614 SUPERFAMILY Class II aaRS and biotin synthetases 377 584 IPR045864 -
Ahy1g2846 614 Gene3D - 102 306 IPR020825 -
Ahy1g2846 614 SMART B5_2 307 380 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Ahy1g2846 614 Gene3D Bira Bifunctional Protein; Domain 2 404 598 IPR045864 -
Ahy1g2846 614 Pfam Phe-tRNA synthetase beta subunit B1 domain 1 90 IPR040659 -
Ahy1g2846 614 SUPERFAMILY Putative DNA-binding domain 309 384 IPR009061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2846 Ahy-Chr1 108938152 108946057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2846 K01890 - gmx:100805249 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2080 11 131800201 131808220 Ahy1g2846 1 108938152 108946057 hybridization