Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2840 ATGAGGTTCCAAATAAGCAACACCGTAGTGGGTGCTCTCAACATTCTATCTCTCCTGCTTGGTCTCTCTGCCCTTGCAACCTCCGCTTACATTCACTTTCACGGAGGTGATGGTGCCTCTGATTGCCAGAAGGTTCTCCAGTATCCTCTCCTCATTGCTGGAGTTTTCATTATCATCATCTCTACGCTTGGCATAGTAGGCTCCCTATGCCGCATCAACTTCGCATTGTATGCCTATCTGCTCATCACCTTCCTTCTTATTGTGGCTATGATTCTCTTTACCATTTTTGCCCTCTTTGTAACAAACAAGAAGGTTGGCCAGCAAGTCTCTACCAGAGCCTATGGCGAGTACGTGGTCACTGATTTCTCTCACTGGCTTCAGCATTACGTTGTCAACAACAAAAATTGGGATGAAGTTAAGAGTTGCTTGATGGATGCTGGTGTTTGCCATGATCTTGCTATCCACGGTGGCTTCAACCATAGCAATGAAGATCTCTTTTTCAAGCACTTGTCCACCACGCAGGTAGGGTGTTGTAAGCCACCTGCGAATTGTGGATTCAAGATGAAGAATGCTACATACTGGGAAGCTCCAAAGACAGGAGCAAGTTGGGCAAATAATTCAGATTGCAAGATTTGGAGTAACAAAGAGGACAAACTTTGTTATGATTGCAATTCATGCAAAGGTGGGGTGTTGGCCAATATAAGGAACCAGTGGAAGCATCTCACCATATTCAACTCTGTTGTGTGTGTGCTTGTAACCGCCATTTATGTTTTGGGATGCTTTGCCATAAGGAACAACCGCATCGACATGTACAACAAGAACCACACACACCCTTGA 837 0.4504 MRFQISNTVVGALNILSLLLGLSALATSAYIHFHGGDGASDCQKVLQYPLLIAGVFIIIISTLGIVGSLCRINFALYAYLLITFLLIVAMILFTIFALFVTNKKVGQQVSTRAYGEYVVTDFSHWLQHYVVNNKNWDEVKSCLMDAGVCHDLAIHGGFNHSNEDLFFKHLSTTQVGCCKPPANCGFKMKNATYWEAPKTGASWANNSDCKIWSNKEDKLCYDCNSCKGGVLANIRNQWKHLTIFNSVVCVLVTAIYVLGCFAIRNNRIDMYNKNHTHP* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2840 278 ProSitePatterns Transmembrane 4 family signature. 54 76 IPR018503 GO:0016021
Ahy1g2840 278 Pfam Tetraspanin family 7 259 IPR018499 GO:0016021
Ahy1g2840 278 PANTHER TETRASPANIN-8 3 270 - -
Ahy1g2840 278 PANTHER TETRASPANIN-8-RELATED 3 270 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2840 Ahy-Chr1 108897496 108898542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2840 3 267 Miscellaneous Gene Families AT1G18520 44.361 2.50e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2840 - - adu:107471116 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2084 11 131922186 131923305 Ahy1g2840 1 108897496 108898542 hybridization