Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2376 ATGGAGGAGCATAGTCAATTGAAGCGTGCCATTATTGATTCCTCTGCTGGGGCAATTTCCGGTGGAATTTCAAGGACAGTAACCTCTCCCCTCGATGTTATTAAGATTAGGTTCCAGGTTCAACTAGAGCCCACATCTTCATGGGCTTTACTACGCAAGGATCTTGCTGCACCATCAAAATACACTGGTATATTTCAAGCATCTAAAGATATTTTCAGAGAAGAAGGTTTTCAGGGTTTTTGGCGGGGGAATGTACCGGCATTGCTTATGGTTATGCCATATACAGCTATACAGTTTACAGTTTTACATAAGTTGAAAACTCTTGCCTCTGGTTCTTCCAAGTCAGAGGATCACAGTAGTTTGAGCCCTTATCTGTCCTATGTCAGTGGGGCATTAGCTGGATGTGCAGCTACAATAGGGTCTTACCCGTTTGATCTTCTCCGAACCATATTAGCTTCTCAGGGGGAGCCAAAGGTGTATCCAAACATGAGGTCAGCATATCTTGATATTGTCCAGACTCGAGGTTACAAAGGCTTGTATGCTGGATTGTCACCGACGCTAGTTGAGATTATACCTTATGCAGGCCTACAATTTGGCACCTATGATACATTTAAGCGTTGGGCCATGGCTTGGAACCATAGATATTCCAATACCACCACAGGAGGTAACCTCTCTAGCTTCGAACTTTTCGTTTGTGGGTTGGCAGCTGGAACATGTGCAAAACTTGTCTGTCATCCGCTTGATGTAGTCAAGAAAAGGTTTCAGATTGAGGGGCTTCAGAGGCATCCAAGATATGGAGCAAGAGTTGAGCTTCATGCATACAGGAATATGTTTGATGCCTTGAGCCAGATAATACGGTCGGAAGGTTGGGCCGGTCTATACAAGGGGATAATACCATCAACCGTTAAAGCCGCACCAGCTGGGGCTGTAACATTTGTTGCATATGAGTTGACTTCTGATTGGCTAGAGTCCCTTTAA 978 0.4458 MEEHSQLKRAIIDSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLAAPSKYTGIFQASKDIFREEGFQGFWRGNVPALLMVMPYTAIQFTVLHKLKTLASGSSKSEDHSSLSPYLSYVSGALAGCAATIGSYPFDLLRTILASQGEPKVYPNMRSAYLDIVQTRGYKGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHRYSNTTTGGNLSSFELFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVELHAYRNMFDALSQIIRSEGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2376 325 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Ahy1g2376 325 PRINTS Mitochondrial carrier protein signature 136 154 IPR002067 GO:0055085
Ahy1g2376 325 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Ahy1g2376 325 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Ahy1g2376 325 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Ahy1g2376 325 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Ahy1g2376 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 108 IPR018108 -
Ahy1g2376 325 SUPERFAMILY Mitochondrial carrier 10 316 IPR023395 -
Ahy1g2376 325 Pfam Mitochondrial carrier protein 224 322 IPR018108 -
Ahy1g2376 325 Pfam Mitochondrial carrier protein 121 208 IPR018108 -
Ahy1g2376 325 Pfam Mitochondrial carrier protein 14 109 IPR018108 -
Ahy1g2376 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 207 IPR018108 -
Ahy1g2376 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 4 324 - -
Ahy1g2376 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 321 IPR018108 -
Ahy1g2376 325 Gene3D Mitochondrial carrier domain 5 324 IPR023395 -
Ahy1g2376 325 PANTHER SOLUTE CARRIER FAMILY 25 4 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2376 Ahy-Chr1 101869991 101873106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2376 1 324 Organic Solute Cotransporters AT3G21390 75.988 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2376 K15108 - gmx:100805353 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2546 11 141318198 141321370 Ahy1g2376 1 101869991 101873106 hybridization
Ahy1g2376 1 101869991 101873106 Ahy14g1076 14 19197590 19201861 PCT
Ahy1g2376 1 101869991 101873106 Ahy4g0981 4 19384375 19388645 PCT
Ahy14g1076 14 19197590 19201861 Ahy1g2376 1 101869991 101873106 PCT
Ahy4g0981 4 19384375 19388645 Ahy1g2376 1 101869991 101873106 PCT