Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2322 ATGGCCGTCTTTACATTCGAGGATGAAATCACCTCCACCGTGCCCCCTGCTAAGCTTTACAATGCTATGAAAGATGCCGACTCCATCACCCCTAAGATTATTGATGACGTCAAGAGTGTTGAAATCGTTGAGGGAAACGGTGGTCCCGGAACCATCAAGAAACTCAACATTGTCGAGGATGGAGAAACCAAGTTTATCTTGCACAAGGTGGAGGCAATAGATGAGGCTAACTATGCATACAACTACAGCGTGGTTGGAGGAGTGGCTCTGCCTCCCACGGCGGAGAAGATAACATTTGAGACAAAGCTGGTACAAGGACCCAACGGAGGATCCATTGGGAAGCTGAGTGTGAAGTTCCACTCCAAAGGAGATGCAAAGCCAGATGAGGAAGCCATGAAGAAGGGGAAGGCCAAGGGTGAAGCTCTCTTCAAGGCCATTGAGGGTTACGTTTTGGCCAACCCTGCTCTCTGTTGA 474 0.4937 MAVFTFEDEITSTVPPAKLYNAMKDADSITPKIIDDVKSVEIVEGNGGPGTIKKLNIVEDGETKFILHKVEAIDEANYAYNYSVVGGVALPPTAEKITFETKLVQGPNGGSIGKLSVKFHSKGDAKPDEEAMKKGKAKGEALFKAIEGYVLANPALC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2322 157 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 87 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy1g2322 157 CDD Bet_v1-like 4 150 - -
Ahy1g2322 157 Gene3D - 1 156 IPR023393 -
Ahy1g2322 157 PANTHER - 1 155 - -
Ahy1g2322 157 PANTHER ABA-RESPONSIVE PROTEIN 1 155 - -
Ahy1g2322 157 SUPERFAMILY Bet v1-like 4 155 - -
Ahy1g2322 157 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Ahy1g2322 157 PRINTS Major pollen allergen Bet V1 signature 48 57 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy1g2322 157 PRINTS Major pollen allergen Bet V1 signature 83 96 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy1g2322 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy1g2322 157 PRINTS Major pollen allergen Bet V1 signature 64 83 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy1g2322 157 PRINTS Major pollen allergen Bet V1 signature 108 124 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy1g2322 157 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2322 Ahy-Chr1 101230492 101231462 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2322 - - gmx:100500525 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0978 14 16330762 16332040 Ahy1g2322 1 101230492 101231462 PCT
Ahy4g0891 4 15179078 15179840 Ahy1g2322 1 101230492 101231462 PCT