Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2296 ATGCAGTCGACTCTCTCACTCTCCTTCTCTCCTTCTTCCTCCGCCGCAGCAGTTTCCAGATCACACACCACCAGATTCTCACTAAACACTTCCACGCCCCTCAATCTCCGCTTCTGCGGCCTCAGGCCTCAGGCATTAGCTTTCAATGCTTCCGGCAACCATCGTTCCTCTAAGCTCCCGTCCCGTCCCCGCTCTCAAGCCATCTCAGCTGCGCTCTCCGCCAATGGCAGCCCTCCCAAATTCTTCGACTATGATTTGTTGATTATTGGCGCTGGCGTCGGCGGCCACGGCGCTGCGCTTCACGCTGTAGAGAAGGGTTTGAAAACGGCAATTGTGGAGGGAGACGTGGTGGGAGGGACGTGTGTGAACAGAGGCTGTGTTCCTTCAAAGGCTCTTTTGGCTGTGGCTGGTCGTATGCGAGAACTGCAGAATGATCACCATTTGAAGTCCTTGGGCTTGCAGGTTTCTGCTGCTGGGTATGACAGACAAGGAGTTGCTGACCATGCTATAAATCTTGCGTCAAAAATCCGCAATAACTTAACCAACTCAATGAAAGCACTTGGAGTAGATATACTTACTGGTTTTGGAAAAATTTTGGGTCCTCAAAAAGTGCAAATTGGCTCCTCAGACAAAATAGTAACTGCAAAAGATATCATTATTGCAACTGGATCTGTTCCTTTTGTTCCCAAGGGAATTGAAATTGATGGGAAGACTGTGATTACCAGTGACCATGCACTCAAACTGGAGTTTGTTCCTGATTGGATAGCAATTGTTGGAAGTGGTTACATTGGCCTTGAATTCAGTGATGTATATACTGCACTTGGAAGTGAGGTTACTTTTGTTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCAGAAATTGGAAAATTGGCTCAGAGGGTTCTTATTAACCCCCGGAATATTGATTATCAAACGGGAGTTTTTGCAAGCAAGATCACGCCGGCAAGGGATGGAAAACCTGTCAGGATTGAACTCATTGATGCAAAGACCAAGGAACCAAAGGACACTTTGGAGGTGGATGCTGCACTAATAGCAACTGGCAGGGCTCCATTCACACAAGGTCTTGGGTTGGAGAATATTGATGTGGTAACACAGAGAGGTTTCGTTCCTGTGGATGAGCGCATGCGAGTAATTGATTCAAATGGAAAGCTGGTACCGCATTTATATTGCATTGGTGATGCAAATGGCAAAATGATGCTTGCTCATGCTGCCAGTGCTCAAGGAATTTCAGTTGTTGAACAAGTTACTGGAAGAGATCACATACTCAATCATTTAAGTGTTCCGGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGACTAACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAAGAGGGTTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCACTAGCAGAAAATGAAGGAGAGGGACTTGCCAAGTTGATATATAGACCTGACAATGGAGAGATACTAGGTGTTCATATTTTTGGTCTGCATGCAGCAGATCTCATCCACGAAGCATCAAATGCAATAGCATTAGGAACACGTATTCAGGACATAAAACTTGCAGTTCATGCTCATCCAACTTTGTCAGAGGTTCTTGATGAGCTGTTCAAGTCAGCAAAGGTTAAAGCACATGCTTCCATCCCAGTAAGTGAACCAGTTGCAGTGTAA 1704 0.4548 MQSTLSLSFSPSSSAAAVSRSHTTRFSLNTSTPLNLRFCGLRPQALAFNASGNHRSSKLPSRPRSQAISAALSANGSPPKFFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVAGRMRELQNDHHLKSLGLQVSAAGYDRQGVADHAINLASKIRNNLTNSMKALGVDILTGFGKILGPQKVQIGSSDKIVTAKDIIIATGSVPFVPKGIEIDGKTVITSDHALKLEFVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEIGKLAQRVLINPRNIDYQTGVFASKITPARDGKPVRIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDERMRVIDSNGKLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHILNHLSVPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKLAVHAHPTLSEVLDELFKSAKVKAHASIPVSEPVAV* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2296 567 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 118 128 IPR012999 GO:0016668
Ahy1g2296 567 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 15 559 - -
Ahy1g2296 567 SUPERFAMILY FAD/NAD(P)-binding domain 75 425 IPR036188 -
Ahy1g2296 567 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 435 546 IPR004099 GO:0045454
Ahy1g2296 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 347 363 - -
Ahy1g2296 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 381 403 - -
Ahy1g2296 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 86 105 - -
Ahy1g2296 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 215 233 - -
Ahy1g2296 567 PRINTS FAD-dependent pyridine nucleotide reductase signature 254 272 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 117 132 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 522 542 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 85 107 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 500 515 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 218 227 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 254 279 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 431 452 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 348 362 - -
Ahy1g2296 567 PRINTS Pyridine nucleotide disulphide reductase class-I signature 396 403 - -
Ahy1g2296 567 Gene3D - 227 354 IPR036188 -
Ahy1g2296 567 PANTHER DISULFIDE OXIDOREDUCTASE 15 559 - -
Ahy1g2296 567 PIRSF Hg-II_reductase_MerA 52 549 IPR001100 GO:0016491
Ahy1g2296 567 Pfam Pyridine nucleotide-disulphide oxidoreductase 84 416 IPR023753 GO:0016491
Ahy1g2296 567 Gene3D - 85 417 IPR036188 -
Ahy1g2296 567 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 434 549 IPR016156 GO:0016491|GO:0050660
Ahy1g2296 567 Gene3D - 434 558 IPR016156 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2296 Ahy-Chr1 100894884 100900359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2296 1 558 Acyl Lipid Metabolism Gene Families AT3G16950 82.478 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2296 K00382 - gmx:100809578 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2636 11 142594491 142599893 Ahy1g2296 1 100894884 100900359 hybridization