Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2278 ATGGACCGGTCCTCATCGGAGAATCTAATTCTTGTAAACCGGGAACCAAACGGCGTCGCTATCATAACCATTAACCGCCCCGGATCTCTCAACTCTCTCACCCGCCCCATGATGGTGGACCTTGCTCAGGCCTTCAAGGCCCTCGACCAAGACCACTCCGTCAAGGTCATCATACTCACCGGCTCCGGCCGATCATTCTGCTCCGGTGTCGACCTAACCGCCGCCGAGGACGTCTTCAAGGGCGACGTCAAGGACCCCGAAAGCGACCCCGTTATTCAAATGGATCGCTGCCGGAAGCCCATAATCGGAGCCATCAAGGGATTCGCCATCACCGCCGGGTTCGAGATTTCACTCGCCTGTGACATCTTGGTCGCCGCCAAAGGATCCAAGTTCATAGACACCCACGCCAGGTTTGGGATATTTCCTTCGTGGGGCTTGTCTCAGAAGCTTTCGCGGATCATAGGAGTCAATAAGGCACGAGAGGTATCCCTGACGGCGACGCCTTTGACGGCGGAGGTTGCTGAGAAATTGGGTTTTGTGAATCATGTCGTTGAGGACAGTGAAGTGTTGAAGAAAAGCAGAGAAATTGCAGAAGCCATAATGAAAAACAATCAGGACTTGGTGTTGAGATACAAATCCGTCATAAACGACGGCATCAAGCTTGATCTTGGCCGTGCTCTTTCGCTTGAAAAGGAGAGAGCTCATGATTATTACAATGGAATGACAAAGGAGCAATTCAAAAAGATGCAGGAATTCATAGCTGGGAGAAAGAAACCGTCCAAATTGTAG 789 0.512 MDRSSSENLILVNREPNGVAIITINRPGSLNSLTRPMMVDLAQAFKALDQDHSVKVIILTGSGRSFCSGVDLTAAEDVFKGDVKDPESDPVIQMDRCRKPIIGAIKGFAITAGFEISLACDILVAAKGSKFIDTHARFGIFPSWGLSQKLSRIIGVNKAREVSLTATPLTAEVAEKLGFVNHVVEDSEVLKKSREIAEAIMKNNQDLVLRYKSVINDGIKLDLGRALSLEKERAHDYYNGMTKEQFKKMQEFIAGRKKPSKL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2278 262 CDD crotonase-like 10 200 - -
Ahy1g2278 262 Gene3D - 2 237 - -
Ahy1g2278 262 PANTHER ENOYL-COA HYDRATASE 4 259 - -
Ahy1g2278 262 Pfam Enoyl-CoA hydratase/isomerase 15 254 IPR001753 GO:0003824
Ahy1g2278 262 SUPERFAMILY ClpP/crotonase 6 259 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2278 Ahy-Chr1 100744797 100746531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2278 18 216 Acyl Lipid Metabolism Gene Families AT1G60550 34.450 2.93e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2278 K01692 - gmx:100170725 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2658 11 142803604 142805280 Ahy1g2278 1 100744797 100746531 hybridization