Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2275 ATGGCTGACCTGAATAATTTCGAGCGCTTCGACGTCGTTTCAGACCATTCAGACCACCACTTTTCCCAACCAACTGCTAACACTACCAAGAAACAGAAACAGAACCGCAACCCGGAACCAACCAACCACGCTGCCCGAAACTGTTTTACAAACACGGGCAGCAAAGTGTACAAGAACATAATGCGAGAATGGAAGATCCTCGCCAACGGCCTGCCCGACTCCATCTACGTCCGCGTCTACGAGAGCCGCATCGATCTCATGAGGGCAGCAATCGTCGGCGCCGCAGGTACACCCTACCACGATGGACTCTTCTTCTTCGATATTGCTTTCCCGCCAAATTACCCGTCCCAACCTCCCAAGGTTCACTACCTCTCTTGCGGGTTCAAACTCAACCCGAACCTTTACCATAACGGCGAAGTGTGCCTCAGCCTCATCAACACCTGGATCGGTAAAAAGAGCGAGAAGTGGGACCCATGCGGTTCAACCGTTTTGCAGCTCCTCGTTTCTCTCCAAGGCCTCGTCCTAAACGACAAGCCGTTTTTCAACGAGGCCGGATCCGAAATCTTCGGACGCGCCTTCTTTGAGAAGCAGGCGCGTTCTTATAACTATTCCGTTTTCTTACTTAGCTGTAGGACTATGCTGTTTTGGCTCCAACGACCTCCGCGGAACTTCGAGGAATTCGTTCACGCGCACTTTCGTGGCAGCGCGTGTCGGATTCTGCGGGCGTGCCATGAGTACGTGAATGGGCGCGTGAGGGTTGGGTGGTACGGTGTGAGCGACGTTGGGGAGAACGGTGACTCTTCCCATCGGTCGCGTGCGAAGGTCCCGGAGGAATTCAAGGCATCGATGGGGAAGTTGTATCTTCGGATGGTTGTGGCGTTTCAACTGAATGGTTCTTCGTTGTGTTCGGAGCTTTTGGAATTAGAGAACAGTGATAAAAATGGTGGTTCGTCGAAGAATAAGGGGCATGGTGGTGACAGAAAGTATGGGAAGATTGTCAGGAAGGTGTTGGGGAAGTTTAGGAAGTTTTATGCTTTGAAGAAGGATCAAAGTAGAAGAGTCGACGTGTCAAAGTGA 1077 0.5162 MADLNNFERFDVVSDHSDHHFSQPTANTTKKQKQNRNPEPTNHAARNCFTNTGSKVYKNIMREWKILANGLPDSIYVRVYESRIDLMRAAIVGAAGTPYHDGLFFFDIAFPPNYPSQPPKVHYLSCGFKLNPNLYHNGEVCLSLINTWIGKKSEKWDPCGSTVLQLLVSLQGLVLNDKPFFNEAGSEIFGRAFFEKQARSYNYSVFLLSCRTMLFWLQRPPRNFEEFVHAHFRGSACRILRACHEYVNGRVRVGWYGVSDVGENGDSSHRSRAKVPEEFKASMGKLYLRMVVAFQLNGSSLCSELLELENSDKNGGSSKNKGHGGDRKYGKIVRKVLGKFRKFYALKKDQSRRVDVSK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2275 358 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 3 314 - -
Ahy1g2275 358 SMART ubc_7 58 214 - -
Ahy1g2275 358 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 3 314 - -
Ahy1g2275 358 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 55 214 IPR000608 -
Ahy1g2275 358 SUPERFAMILY UBC-like 47 221 IPR016135 -
Ahy1g2275 358 Gene3D Ubiquitin Conjugating Enzyme 1 290 IPR016135 -
Ahy1g2275 358 MobiDBLite consensus disorder prediction 19 46 - -
Ahy1g2275 358 MobiDBLite consensus disorder prediction 16 46 - -
Ahy1g2275 358 CDD UBCc 57 201 IPR000608 -
Ahy1g2275 358 Pfam Ubiquitin-conjugating enzyme 60 184 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2275 Ahy-Chr1 100720527 100723096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2275 7 305 Miscellaneous Gene Families AT2G33770 45.667 2.52e-71 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2275 K10581 - gmx:100811389 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2659 11 142815505 142816796 Ahy1g2275 1 100720527 100723096 hybridization