Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2260 ATGGCGAAACACGAGGAGCTTCCGATCCCGATTTTCCAAAGCTTGAACGATGTCTATGGCGAAGGCTCGCAGCTCGAAGAAGCTAAGCTCCGCTTTGACACGGCCAAGTCCAAGTTTCAAGAATTCTTCGGTCACGCGCCTCAACTCTTCGCTCGCTCACCTGGGAGAGTGAACTTGATTGGGGAGCACATTGACTATGAGGGATATTCGGTGTTGCCTATGGCAATTCGGCAAGATACGATCGTGGCGATTCGGAAGAATGAAAGCAGCAAGGAGCTTAGGATCGCTAATGTTAATGATAAAAAGTATTCCATGTGCACTTACCCTGCTGACCCCAACCAGCAACTCGATTTGAAGAATCACAAATGGGGCCACTATTTTATTTGTGGGTACAAAGGTTTCCACGACTATGCAAAAGCAAAAGGGGTGAATGTTGGTCCACCAGTTGGACTTGATGTTGTTATTGATGGAATTGTGCCAACAGGTTCTGGACTATCAAGTTCTGCAGCATTTGTTTGTTCTTCCACAATTGCTATTATGGCTGCTTTTGATGCTAACTTCCCAAAGGCAATCTCTGTCATGGCCAAAACCGGCTTTGCAGAGCTGATTGATTTCAACCCAATTCGTGCAACTGATGTGCAACTTCCTGCTGGCGGGACTTTTGTGATAGCCCATTCTTTGGCAGAGTCTCAGAAGGCTGTTACTGCTGCTACAAATTATAATAATAGGGTTGTTGAATGCCGTTTGGCTTCTATTGTGCTTGGTATAAAGTTGGGGCTGAATCCCAAAGAGGCAATGTCAAAAGTGAGCACATTGTCTGACGTTGAAGGATTATGTGTACAATTTGCTGGTAAACATAATTCCTCTGATCCAGTACTTGCTGTCAAGGAATATTTGAAGGAAGAACCATATACAGCTAAAGAAATTGAGGCAATTACGGGTGAAAAGTTGACGTCATTTTTGGGCGGCAATGCTGCTTATTTGGAAGTTTTAAAAGTTGCAAAGCACTACAAATTACATCAGAGAGCTGCTCATGTTTATTCGGAAGCCAAGAGGGTGCACGCTTTCAAGGACGTTGTATCATCAAATCTAAGTGATGAGGAGATGCTAAAGAAGCTTGGTGACCTAATGAACGAGAGTCATTATAGCTGCAGCGTTTTATATGAATGCAGCTGTCCTGAGTTGGAAGAACTCGTAAAAGTTTCTCGTGAGAATGGTGCTCTTGGGGCAAGGCTTACTGGAGCTGGATGGGGTGGCTGTGCTGTTGCTTTGGTGAAAGAGAGCATAGTCCCACAGTATATCCTTAATTTGAAGGAACATTATTTCCAAAAGAGGATTGACAAGGGTGTTATCAAGAAGGACGACCTTGGTCTTTATCTTTTTGCTTCGAAGCCATCAAGTGGTGCTGCCATCTTCAAGTTCTAA 1425 0.4407 MAKHEELPIPIFQSLNDVYGEGSQLEEAKLRFDTAKSKFQEFFGHAPQLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNESSKELRIANVNDKKYSMCTYPADPNQQLDLKNHKWGHYFICGYKGFHDYAKAKGVNVGPPVGLDVVIDGIVPTGSGLSSSAAFVCSSTIAIMAAFDANFPKAISVMAKTGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECRLASIVLGIKLGLNPKEAMSKVSTLSDVEGLCVQFAGKHNSSDPVLAVKEYLKEEPYTAKEIEAITGEKLTSFLGGNAAYLEVLKVAKHYKLHQRAAHVYSEAKRVHAFKDVVSSNLSDEEMLKKLGDLMNESHYSCSVLYECSCPELEELVKVSRENGALGARLTGAGWGGCAVALVKESIVPQYILNLKEHYFQKRIDKGVIKKDDLGLYLFASKPSSGAAIFKF* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2260 474 PANTHER BNAA01G32760D PROTEIN 1 189 - -
Ahy1g2260 474 PANTHER BNAA01G32760D PROTEIN 189 473 - -
Ahy1g2260 474 Gene3D - 239 385 - -
Ahy1g2260 474 PRINTS Mevalonate kinase family signature 409 426 - -
Ahy1g2260 474 PRINTS Mevalonate kinase family signature 157 179 - -
Ahy1g2260 474 PRINTS Mevalonate kinase family signature 53 77 - -
Ahy1g2260 474 Gene3D - 386 456 - -
Ahy1g2260 474 SUPERFAMILY GHMP Kinase, C-terminal domain 220 450 IPR036554 -
Ahy1g2260 474 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 217 IPR020568 -
Ahy1g2260 474 Pfam Galactokinase galactose-binding signature 38 86 IPR019539 -
Ahy1g2260 474 PRINTS Galactokinase signature 341 355 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Ahy1g2260 474 PRINTS Galactokinase signature 55 73 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Ahy1g2260 474 PRINTS Galactokinase signature 150 168 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Ahy1g2260 474 PIRSF Galactokinase 22 190 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Ahy1g2260 474 PIRSF Galactokinase 186 474 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Ahy1g2260 474 PANTHER MEVALONATE KINASE/GALACTOKINASE 1 189 - -
Ahy1g2260 474 PANTHER MEVALONATE KINASE/GALACTOKINASE 189 473 - -
Ahy1g2260 474 Pfam GHMP kinases N terminal domain 152 185 IPR006204 GO:0005524
Ahy1g2260 474 Pfam GHMP kinases C terminal 370 441 IPR013750 -
Ahy1g2260 474 ProSitePatterns GHMP kinases putative ATP-binding domain. 159 170 IPR006203 GO:0005524
Ahy1g2260 474 ProSitePatterns Galactokinase signature. 55 66 IPR019741 -
Ahy1g2260 474 Gene3D - 23 226 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2260 Ahy-Chr1 100475253 100480731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2260 K18674 - gmx:100803230 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2677 11 143119769 143125193 Ahy1g2260 1 100475253 100480731 hybridization