Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1905 ATGGGGGCTTGTTTTTCTTGTGGAGCAAGATCATCCTCAAATTTCAAGAGCATCCGTGTGGTTCATCTGAATGGACATGTTGAAGAATTTGATGAACCAATCTCAGCAGGACAAGTTATTTTTGGTGTAGGCAGCAGCACAAAGCAGTACTTTGTTTGCACAGCAATTCAGCTTCTATCATCTTGTTCATCTTCAATGTCATTGAAGGAAGATGCACAACTTCAACCTGGTCAAATTTATTTCATGCTTCCATATTCAATTCTTCATGCTGATGTTTCCCCTGTTGACTTGGCTTCACTTGCTAAGAGGCTCAATGCAATTGCCAGAACAAGGCCATGTTTGGATTATAGTAGTAATAATACTAATAAAAATAAGTCCATGAAAGAAGGTTTTTTGTCTTGCCAAACACAGGTTTGGAATCCTATTATTACTTCTTCTCCTTCAAATAGTGTTGTTGGGGTGATGGGTGAAGAAAAAGGGAGTGTTTATAGGGTGATGCAGCAGCCATGGAAGCCTATCTTGGACACTATAAAGGAGAAATCATTTACAAAGAGAAGTGAATCGGATTTGCAGGAGAATGGTTCTCTGATATCATCTTTTACATGGAGAAGTGAATCTGACTTGCAAGAGAATGATTTGTTTTTGCAAGAGATTAATGGATCAAGACAACCAGATAGGAAGAGGTGCATAAAGTACATGTCATGA 705 0.3858 MGACFSCGARSSSNFKSIRVVHLNGHVEEFDEPISAGQVIFGVGSSTKQYFVCTAIQLLSSCSSSMSLKEDAQLQPGQIYFMLPYSILHADVSPVDLASLAKRLNAIARTRPCLDYSSNNTNKNKSMKEGFLSCQTQVWNPIITSSPSNSVVGVMGEEKGSVYRVMQQPWKPILDTIKEKSFTKRSESDLQENGSLISSFTWRSESDLQENDLFLQEINGSRQPDRKRCIKYMS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1905 234 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 191 - -
Ahy1g1905 234 Pfam PADRE domain 1 179 IPR025322 -
Ahy1g1905 234 PANTHER OS06G0700300 PROTEIN 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1905 Ahy-Chr1 95691169 95692309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1905 - - aip:107642728 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3068 11 148337153 148338318 Ahy1g1905 1 95691169 95692309 hybridization
Ahy1g1905 1 95691169 95692309 Ahy14g1263 14 28869542 28870434 PCT
Ahy14g1263 14 28869542 28870434 Ahy1g1905 1 95691169 95692309 PCT