Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1680 ATGGGAGACAAACGTAAGAGAGGTCGGAAATCCAAAACCCCCACCTCCGCCTCCGAAACCCTAGGCTCACCTTCCACCACCGCCCCTAACGCCGCCACTGCCACCGCCACTCCTTCCACCATTGACGACGTCTTCTCCGTCGCCAACGTTAACCTCATGGACACTACTGCCTCCCCGCACCAACGTCGACGCCCTGGCCGCCCCAAGAAAGTCCCCCACCAGTCCGACAGGCCGGGACGCCGCCAGTCCTCCCGTCCCCCAGTCGATGCCAACGGCGCCGTCGAGGTCCCCCCGGCGGCTGAGGCAATGGAGGAGGACCCCGTGTGGGAGAACGTAGTTCCTGGTCGAGTGGTGCCGGCGATGGACTCGGTGGTGAAGGTTTTCTGCGTTCACACGGAGCCGAATTTCTCTCTGCCGTGGCAGCGGAAGAGGCAGTACAGCTCGAGCAGCAGTGGGTTCGTGATCGGCGGGAGGAGGTTGCTGACGAACGCTCACTCGGTGGAGCATTACACGCAGGTTAAGGTCAAGAAGCGTGGCTCAGATACTAAGTACTTGGCCACAGTTCTCGCCATTGGAACCGAGTGCGACATTGCCATGCTCGCAGTTGATGATGATGAGTTCTGGCAAGGGATGTCACCTGTAGAGTTTGGGAATTTGCCCGCACTTCAGGATGCAGTCACTGTTGTGGGGTACCCAATTGGTGGTGATACTATTTCCGTAACCAGTGGTGTTGTATCACGCATTGAGATCCTATCTTATGTCCATGGTTCGACTGAACTTCTAGGTTTACAGATAGATGCTGCTATAAATTCTGGCAATTCCGGTGGACCTGCATTTAATGATAAAGGAAACTGTGTGGGCATTGCATTTCAGTCCCTTAAGCACGAAGATGCGGAGAATATAGGTTATGTTATTCCAACACCAGTGATCAATCATTTCATCCAGGATTATGAGAAAAATGGAAGATACACTGGGTTCCCTGTTCTTGGGGTTGAGTGGCAAAAGATGGAAAATCCTGATCTAAGAATGGCAACAGGCATGAGAACTGACCAGAAAGGTGTGCGAATTAGAAGAGTTGATCCTACTGCTCCAGAATCCAAGGTTTTGAAGGCATCAGATGTTATTCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGAACAGTTCCATTTCGCCATGGGGAGCGCATTGGTTTCAGTTACCTCATATCCCAGAAATATACTGGTGATAATGCTGTAATTAAAGTATTAAGAAATTCAGAGGTCCTCAATTTTGACATTAAACTCGATAGTCATAGAAGACTAATTCCAGCACACACCAAGGGCAGGCCTCCTTCATATTATATCATTGCAGGATTTGTTTTTACAACCGTTTCAGTTCCATATCTTCGATCTGAGTATGGAAAGGATTATGAGTATGAAGCTCCTGTCAAACTTTTGGATAAACTGCTGCATTCAATGCCGCAATCGCCAGATGAACAACTTGTTGTGGTTTCTCAGGTGTTGGTGGCTGATATCAATATTGGATATGAAGAGATTGTCAACACCCAGGTCCTTGCTTTTAATGGTCAACCTGTGAAAAATCTCAAGAGCTTGGCCAATATGGTAGAGAGCTGCAACGATGAATACCTGCAATTTAATCTAGACTACGAACAGATCGTGGTTCTTCGCACAAAGACTGCAAAGGCAGCTACTCTAGACATACTTTCAACCCACTGCATTCCCTCAGCGATGTCCGATGATCTGAAGTCATGA 1755 0.4889 MGDKRKRGRKSKTPTSASETLGSPSTTAPNAATATATPSTIDDVFSVANVNLMDTTASPHQRRRPGRPKKVPHQSDRPGRRQSSRPPVDANGAVEVPPAAEAMEEDPVWENVVPGRVVPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRLLTNAHSVEHYTQVKVKKRGSDTKYLATVLAIGTECDIAMLAVDDDEFWQGMSPVEFGNLPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDAENIGYVIPTPVINHFIQDYEKNGRYTGFPVLGVEWQKMENPDLRMATGMRTDQKGVRIRRVDPTAPESKVLKASDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAVIKVLRNSEVLNFDIKLDSHRRLIPAHTKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEEIVNTQVLAFNGQPVKNLKSLANMVESCNDEYLQFNLDYEQIVVLRTKTAKAATLDILSTHCIPSAMSDDLKS* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1680 584 MobiDBLite consensus disorder prediction 1 40 - -
Ahy1g1680 584 PANTHER - 1 583 - -
Ahy1g1680 584 SUPERFAMILY Trypsin-like serine proteases 119 322 IPR009003 -
Ahy1g1680 584 Pfam PDZ domain 327 429 IPR001478 GO:0005515
Ahy1g1680 584 Gene3D - 325 434 IPR036034 GO:0005515
Ahy1g1680 584 PRINTS HtrA/DegQ protease family signature 259 276 IPR001940 GO:0004252|GO:0006508
Ahy1g1680 584 PRINTS HtrA/DegQ protease family signature 152 164 IPR001940 GO:0004252|GO:0006508
Ahy1g1680 584 PRINTS HtrA/DegQ protease family signature 180 200 IPR001940 GO:0004252|GO:0006508
Ahy1g1680 584 PRINTS HtrA/DegQ protease family signature 222 246 IPR001940 GO:0004252|GO:0006508
Ahy1g1680 584 PRINTS HtrA/DegQ protease family signature 368 380 IPR001940 GO:0004252|GO:0006508
Ahy1g1680 584 Gene3D - 208 319 IPR043504 -
Ahy1g1680 584 Pfam Trypsin-like peptidase domain 151 288 - -
Ahy1g1680 584 CDD PDZ_serine_protease 327 427 - -
Ahy1g1680 584 Pfam PDZ domain 436 581 IPR041517 -
Ahy1g1680 584 Gene3D - 435 584 IPR046449 -
Ahy1g1680 584 SUPERFAMILY PDZ domain-like 352 434 IPR036034 GO:0005515
Ahy1g1680 584 MobiDBLite consensus disorder prediction 14 40 - -
Ahy1g1680 584 Gene3D - 110 207 IPR043504 -
Ahy1g1680 584 PANTHER PROTEASE DO-LIKE 9 1 583 - -
Ahy1g1680 584 MobiDBLite consensus disorder prediction 52 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1680 Ahy-Chr1 87775881 87781195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1680 K25897 - gmx:100791040 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1760 11 112400378 112405687 Ahy1g1680 1 87775881 87781195 hybridization