Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1494 ATGAATACTGGAACCTATGGATATCCCAAACAAGGAGTGAAAAAGATTGATCCGTCCTATGATGTTCCAGAAGGAGTGGACAATCGGGGAAGATATGATGAGGAGTTTGCAAAAATCCTCACAAAGGATGCTCTGAAGTTTGTTGCTGAGTTGCAACGTGAGTTCAGGAGCCATATAAGGTATGCTCTGGAGTGCAGAAAAGAGGCAAAGAGGAGGTACAATGAAGGGGCTCTGCCGGGGTTCGATCCGGCGACGAGGTACATAAGGGAAGGGGAGTGGGTGTGTGCACCGGTTCCACCGGCTGTGGCTGATAGGAAGGTAGAGATCACAGGACCTGTGGAGAGGAAGATGGTTATCAATGCTCTCAACTCTGGAGCTAAAGTCTTTATGGCTGATTTTGAAGATGCACTCTCACCAAGCTGGGAGAATCTTATGAGGGGTCAAGTGAACTTGAAGGATGCAGTGGCTGGGACTATAACCTTCAACGACAAAGCCAGGAACAAGGTTTACAAGCTCAACGATCAGACAGCTAAGCTTTTTGTCAGACCAAGAGGTTGGCACCTACCCGAGGCCCATATTTTCATTGATGGTGAACCAGCAACCGGTTGCCTTGTTGATTTCGGCCTCTACTTCTACCACAATCATGCACCGTTCCGCCAGACTCAGGGTGCAGGCTTTGGCCCTTTCTTCTATCTTCCAAAAATGGAGCACTCAAGGGAAGCTAAGATATGGAATAATGTGTTTGAGAGGGCAGAGAAGATGGCAGGCATAGAAAGGGGAAGCATACGGGCCACTGTTCTGATTGAAACACTTCCTGCTGTGTTTCAAATGAACGAAATTCTGTATGAGCTGAGGGACCACTCCGTTGGTCTCAACTGTGGCCGTTGGGATTACATTTTCAGTTATGTCAAGACCTTCCAAGCTCACCCGGATCGGCTGCTCCCGGACAGGGTTCTTGTTGGCATGACTCAGCACTTCATGAAGAGCTACTCTGACCTTCTCATCCGGACGTGTCATAGGCGTGGCGTGCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATTAGAGATGATCCAGCTGCTAATGAGGCAGCACTGGAACTGGTAAGGAAGGACAAACTAAGAGAAGTAAAGGCAGGGCACGACGGAACATGGGCAGCACACCCCGGTCTGATACCAGCCTGCGTGGAGGTTTTTAACAACAACATGGGCAATGCTCCTAATCAGATCAAGGACGCGAAGCGCGATGATGCTGCAAGCATAACTGAAGAAGACCTCTTGCAAATACCTAGAGGTGTACGTACAATGGATGGTCTCCGCTTGAATACACGTGTCGGTATTCAGTATGTGGCGGCATGGCTCACTGGATCTGGTTCAGTTCCTCTTTACAACCTCATGGAAGATGCTGCCACTGCTGAGATTAGCAGGGTGCAGAACTGGCAGTGGATCAAGTATGGAGTGGAGTTGGATGGGGATGGACTCGGAGTAAGAGTGAGCAAGGAGCTCTTCAGCCGAGTGGTTGAGGAAGAGATGGCTAGGATTGAAAGTGAGGTGGGAAAAGATAAATTCAAGAAGGGAATGTATAAGGAGGCTTGCAAGATCTTCAAAAGGCAGTGCACTGCTCCAACACTGGATGATTTTCTGACCCTGGATGCCTACAATTACATAGTCATACAACACCCCAAGGGACCAGCAAAGCTTTGA 1704 0.4888 MNTGTYGYPKQGVKKIDPSYDVPEGVDNRGRYDEEFAKILTKDALKFVAELQREFRSHIRYALECRKEAKRRYNEGALPGFDPATRYIREGEWVCAPVPPAVADRKVEITGPVERKMVINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVAGTITFNDKARNKVYKLNDQTAKLFVRPRGWHLPEAHIFIDGEPATGCLVDFGLYFYHNHAPFRQTQGAGFGPFFYLPKMEHSREAKIWNNVFERAEKMAGIERGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIRDDPAANEAALELVRKDKLREVKAGHDGTWAAHPGLIPACVEVFNNNMGNAPNQIKDAKRDDAASITEEDLLQIPRGVRTMDGLRLNTRVGIQYVAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIKYGVELDGDGLGVRVSKELFSRVVEEEMARIESEVGKDKFKKGMYKEACKIFKRQCTAPTLDDFLTLDAYNYIVIQHPKGPAKL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1494 567 Pfam Malate synthase 30 557 IPR001465 GO:0004474|GO:0006097
Ahy1g1494 567 ProSitePatterns Malate synthase signature. 285 300 IPR019830 GO:0004474|GO:0006097
Ahy1g1494 567 PANTHER MALATE SYNTHASE 19 567 IPR006252 GO:0004474|GO:0006097
Ahy1g1494 567 PANTHER MALATE SYNTHASE 19 567 - -
Ahy1g1494 567 Gene3D Malate synthase, domain 3 23 432 IPR046363 -
Ahy1g1494 567 SUPERFAMILY Malate synthase G 23 558 IPR011076 GO:0003824
Ahy1g1494 567 TIGRFAM malate_syn_A: malate synthase A 39 556 IPR006252 GO:0004474|GO:0006097
Ahy1g1494 567 Gene3D Malate synthase, domain III 433 557 IPR044856 -
Ahy1g1494 567 PIRSF Malate_synth 18 558 IPR006252 GO:0004474|GO:0006097
Ahy1g1494 567 CDD malate_synt_A 39 557 IPR006252 GO:0004474|GO:0006097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1494 Ahy-Chr1 58018310 58023997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1494 K01638 - gmx:732628 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1551 11 71663750 71667028 Ahy1g1494 1 58018310 58023997 hybridization