Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1405 ATGGCTGATCTGTTTGCGTGGCTCATCTCCTTCTTCATCCTTATTGCCTTGCTTGTCATCGTTATTTACCAGTTAATGTGTTTGGCAGATCTAGAGTTTGATTATATAAATCCTTACGATTCCTCATCGCGAATAAACAAAGTGATTTTACCTGAGTTTATAACACAAGGTGTCCTATGCTGCTTCTACCTTATAACAGGGCATTGGGTTATGTCACTATTTTGTGTTCCTTACCTCTACTACAATTATAGATTGTACAATCAAGGAAAGCATTTGGTTGATGTTACAGAGATATTCAACTTGCTCCCTCGGGAAAAGAAGCAACGACTCATTAAGCTCTTCTATCTTGTTTTGCTCCTCTTCCTTTCCATATTCTGGATGATCTATGTGTCATTGGATGATCACGATGCCTAA 414 0.3841 MADLFAWLISFFILIALLVIVIYQLMCLADLEFDYINPYDSSSRINKVILPEFITQGVLCCFYLITGHWVMSLFCVPYLYYNYRLYNQGKHLVDVTEIFNLLPREKKQRLIKLFYLVLLLFLSIFWMIYVSLDDHDA* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1405 137 PANTHER CORNICHON FAMILY PROTEIN 1 135 - -
Ahy1g1405 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Ahy1g1405 137 PANTHER CORNICHON-RELATED 1 135 - -
Ahy1g1405 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1405 Ahy-Chr1 47660810 47663721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1405 K20368 - gmx:100799061 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1439 11 58543185 58546173 Ahy1g1405 1 47660810 47663721 hybridization
Ahy1g1405 1 47660810 47663721 Ahy15g0954 15 14349622 14352325 PCT