Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1346 ATGCGAGTGAAGGAAATGCACCCGTTGTGTTGCATCTCGCTGGAGAGTCCAGGGATCGGTGGCGGAGGTGACTCGCCGGAGGCGGCAGACGCGGCGGCGCTGTCGAGGACCAGGAGTCTGCCGGCGAGTTTCGCAGCGGCGGGTGGCGGATCTGATGGAGGAGGATGTTGTGGACCGGAGGAGACGGTGGCGGGAGTACTGTACAAATGGACGAATTACGGCAAGGGCTGGAGATCCCGGTGGTTCGTCCTCCGCAACGGCGTCCTCTCCTACGCTAAGATCCGGTGGCCTGAGTATCTCAACCTCCTCCCTCGTCTTGACGACGTCCACCTCATCGGCGAAGTCTCCGCCAACCGCCTCGCTCGCTTCGACCGCGGTGCCGCCGCTGCTTCCTCCATCCGCCGCAAGAGCCACAAACCTCCCTCTTCCTCCGGCGTTGTCCATCTCAAGATCTCGTCATTTAGAGAGAGTAAGTCAGATGATAGGAGGTTCTATATATTCACAGCAACGAAGACTCTCCATCTGAGAACCGATTCGAGGAGGGACCGTGTGGCGTGGATACAGGCTTTGGTGTCAACCCGTGGCTTGTATCCATCACTTAGACCACTCATTAGTGATCACATCATATCTTCTCTCGCACCAAACCATGTGTCTGTGTCAACCGAGAGGCTCAAGAAACGGTTGCTTGAAGAAGGTACCAGTGAGACCCTCGTGAAGGACTGTGAGCAAATCATGCTCTCCGGGTTCAACGAGTTACAAGGGCAGCTTAAAATCCTGTGCCAAGAGAGATTGAACTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAATATTGAACCTGAGGCCTCTGCCATACATGATGGTGAATACCAATTGACAAAGAATGGATTTTCAAGTCTAGGACGCGCAAAATATAGCGAATGCAGTACAACTGAATCGTCTGATGATATCGAGAAGCAGGAGTTGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTATTTTACAGAACCTGGTTTTAGGTGTGGGTCAATAGGAACTTTGGACCAAGTGAACGGGTCTAAAGAAGCAAACACAGAATGTATTGATATGGAAAACATTAGTATTGAGAAGGCAATCAATAGTTTCAGATACCCTCACATAGTTAGGAGGAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGCGTAAGTTTATGGTCAATGATCAAAGACAATGTGGGCAAAGATCTCACACGAGTTTGTCTTCCTGTGTACTTTAATGAACCGATATCATCACTTCAGAAGTGTTTCGAGGACTTGGAGTACTCTTACCTCCTGGACCGAGCTTATGAATATGGAAAATCAGGAAATAGTCTCCTTAGGGCACTGAATGTTGCTGCATTTGCAGTTTCTGGATATGCATCATCTGAAGGGCGTCATTGTAAACCCTTTAATCCTTTGTTAGGGGAAACTTATGAGGCTGACTTTCCTGACAAAGGACTTCGCTTCTTTTCTGAGAAGGTTAGCCACCATCCAACTGTAGTTGCGTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCGTTCAAAGTTTTGGGGAAGGTCCATTCAACTTGACCCGGTGGGAGTTCTTACCCTTCAGTTTGATGACGGTGAAACATTTCACTGGAGCAAGGTGACGACAACAATTTATAATCTTATCCTTGGAAAAATATATTGTGATCATCATGGGAACATGGACATTCGTGGCAATCGCCAGTATTCAATCAGACTCAAGTTCAAAGAACAGACGATTCTGGACCGAAATCCTCATCAGGTGAATGGATTTGTTGAAGATTTAAGGGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTACTATGTTAATGGTGATGTGAATGTGAAGCCAAAAGGTTTCAATTCGTCAGATTCAACCTTGTTGTGGAAAAGGGTTATGCCACCCACTAATCTCACTCGGTACAATTTGACATCATTTGCCATCACACTCAACGAGCTTACACCAGGACTCAAGGAGAAACTCCCGCCCACTGATTCCAGGCTGAGGCCAGATCAGCGGCATCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAGAAACAAAGATTGGAAAAGAGGCAAAGAATGTCACGAAAAATACAAGAAAGTGGTTGGAAGCCGAAATGGTTCCACCAAGAAGGTGAAAATGGAACATTTCGATATATTGGCGGGTATTGGGAAACGAGAGCTCAAGGAAAATGGGATGGATGCCCAGATATATTTGGTGAATTTAATGAAGTCACTGTGGAACCATTGGATGCGTCTTGA 2349 0.4704 MRVKEMHPLCCISLESPGIGGGGDSPEAADAAALSRTRSLPASFAAAGGGSDGGGCCGPEETVAGVLYKWTNYGKGWRSRWFVLRNGVLSYAKIRWPEYLNLLPRLDDVHLIGEVSANRLARFDRGAAAASSIRRKSHKPPSSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRRDRVAWIQALVSTRGLYPSLRPLISDHIISSLAPNHVSVSTERLKKRLLEEGTSETLVKDCEQIMLSGFNELQGQLKILCQERLNLLDTIRQLEAANIEPEASAIHDGEYQLTKNGFSSLGRAKYSECSTTESSDDIEKQELEEVSDEDEISYYDTREYFTEPGFRCGSIGTLDQVNGSKEANTECIDMENISIEKAINSFRYPHIVRRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGLRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLQFDDGETFHWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSIRLKFKEQTILDRNPHQVNGFVEDLRGKKVATLFGKWDDSMYYVNGDVNVKPKGFNSSDSTLLWKRVMPPTNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKIQESGWKPKWFHQEGENGTFRYIGGYWETRAQGKWDGCPDIFGEFNEVTVEPLDAS* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1346 782 Gene3D - 58 195 IPR011993 -
Ahy1g1346 782 SMART PH_update 61 197 IPR001849 -
Ahy1g1346 782 ProSiteProfiles PH domain profile. 60 195 IPR001849 -
Ahy1g1346 782 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 773 IPR000648 GO:0008289
Ahy1g1346 782 Gene3D - 489 662 - -
Ahy1g1346 782 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 773 - -
Ahy1g1346 782 SUPERFAMILY PH domain-like 61 192 - -
Ahy1g1346 782 Pfam Oxysterol-binding protein 403 756 IPR000648 GO:0008289
Ahy1g1346 782 Gene3D - 699 759 - -
Ahy1g1346 782 Coils Coil 700 720 - -
Ahy1g1346 782 Pfam Pleckstrin homology domain 65 190 - -
Ahy1g1346 782 SUPERFAMILY Oxysterol-binding protein-like 398 774 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1346 Ahy-Chr1 42278202 42291024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1346 K20456 - gmx:100793692 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1374 11 50605234 50617406 Ahy1g1346 1 42278202 42291024 hybridization