Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1344 ATGGCAACTTTGTCTCAAACACAAGGGGAGACCATTCCCGATGCCTGGGACTACAAGGGTCGCCCAGCTGAGAGGTCCAAAACTGGTGGTTGGGCTGCTGCAGCCATGATCTTAGGAGGAGAAGCATGTGAGAGGTTAACCACGCTTGGAATCGCGGTGAATCTGGTGACGTATTTGACGGGTACGATGCATTTAAGAAATGCTGCTTCTGCAAACATAGTAACCAACTTCCTCGGAACCTCTTTCATGCTCTGCTTGCTCGGTGGCTTCTTGGCTGATACTTTTATTGGAAGATACCTCACCATAGCCATCTTCGCAACCGTTCAAGCAACTGGAGTAACAATCTTGACAATATCGACCATAATTCCGGGACTACACCCTCGGAAATGCAAAGACCCATCCACACCTTGTGTACCTGCATCAAATACGCAACTCATGGTACTATACTTGGCGCTATACACAATCGCCCTCGGCACCGGAGGACTCAAATCTAGCGTCTCAGGCTTCGGCTCCGACCAGTTTGACGAGTCGAACAAAGGGGAGAAGGGACAAATGACTAAGTTCTTCAACTGGTTCTTCTTCTTCATAAGCATAGGGTCCCTTTTGGCGGTTACGGTTCTTGTTTATATTCAAGATAACTTTGGCAGGGACTGGGGTTATGGTATATGTGCATGTGCTATATTGTGTGGATTGGTTGTGTTCTTGTCTGGAACTAGAAGGTACCGGTTCAAGAAACTGGTGGGGAGCCCGCTGACGCAGATCGCGGTGGTGTTTGTGGCGGCATGGAGGAAGAGGAGGTTGGAACTGCCATCAGATTCGTCGTTGCTGTTCAACGTTGATGACATCATCTCTGATGAAGCAATCAGTAAGAAGAAGCAGATGTTGCCTCATACCAAGCAGTACCGATTCTTGGACAAGGCAGCAATTAGGGACTCAAACACCGTCGGCGGCGAAACCACGGCGGAGAGAAAATGGTATCTATCAACCTTAACCGACATTGAAGAAGTAAAAATGGTTTTAAGGATGTTGCCAATATGGGCCACCACCATCATGTTTTGGACAATCTACGCTCAAATGAGCACATTCTCAGTGTCACAAGCCACCACCATGGACCGCCACATCGGAAAATCGTTCCAAATACCCGCGGCATCACTCACCGTCTTCTTTGTCGGAAGCATACTCCTTACCGTCCCCGTCTACGACCGCGTGGTTGTCCCAATCATGAGAAAATCACTCAAGAACCCGCAAGGGCTGACGCCTTTGCAACGTATCGGCGTAGGGTTAGTACTCTCAATCTTCGCCATGGTTGCAGCCGCACTCACTGAGATAAAGCGATTAAGGGTAGCTGAGTCACATGGATTGGATCATGATGATGCTTCTAAGGTGGTCCCGTTGAGCGTGTTCTGGCTAATCCCTCAGTTCTTCTTTGTGGGGTCAGGAGAGGCATTCACCTACATAGGTCAACTAGATTTCTTCCTAAGGGAATGTCCCAAAGGGATGAAAGCAATGAGCACCGGTTTGTTCTTGAGCACCTTATCCTTAGGGTTCTTCTTCAGCTCCTTGTTGGTGACCATAGTGGACAAGGTCACCGGAACCCGAAAGCCATGGCTAGCCGACAACCTTAACAAAGGGAAACTCTACAATTTCTATTGGCTATTGGCTACTCTAAGTGCTTTCAACGTCGTGATTTTCTTACTATGTTCCAAGTGGTATGTTTACAAGGATAAAAGGCTTGCCGAGGAGGGCATTGAACTTGAGGAATCAGACACTGCTTACCATGCATAG 1785 0.4818 MATLSQTQGETIPDAWDYKGRPAERSKTGGWAAAAMILGGEACERLTTLGIAVNLVTYLTGTMHLRNAASANIVTNFLGTSFMLCLLGGFLADTFIGRYLTIAIFATVQATGVTILTISTIIPGLHPRKCKDPSTPCVPASNTQLMVLYLALYTIALGTGGLKSSVSGFGSDQFDESNKGEKGQMTKFFNWFFFFISIGSLLAVTVLVYIQDNFGRDWGYGICACAILCGLVVFLSGTRRYRFKKLVGSPLTQIAVVFVAAWRKRRLELPSDSSLLFNVDDIISDEAISKKKQMLPHTKQYRFLDKAAIRDSNTVGGETTAERKWYLSTLTDIEEVKMVLRMLPIWATTIMFWTIYAQMSTFSVSQATTMDRHIGKSFQIPAASLTVFFVGSILLTVPVYDRVVVPIMRKSLKNPQGLTPLQRIGVGLVLSIFAMVAAALTEIKRLRVAESHGLDHDDASKVVPLSVFWLIPQFFFVGSGEAFTYIGQLDFFLRECPKGMKAMSTGLFLSTLSLGFFFSSLLVTIVDKVTGTRKPWLADNLNKGKLYNFYWLLATLSAFNVVIFLLCSKWYVYKDKRLAEEGIELEESDTAYHA* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1344 594 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy1g1344 594 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 586 - -
Ahy1g1344 594 SUPERFAMILY MFS general substrate transporter 21 576 IPR036259 -
Ahy1g1344 594 Pfam POT family 99 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy1g1344 594 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Ahy1g1344 594 Gene3D MFS general substrate transporter like domains 3 581 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1344 Ahy-Chr1 41270214 41279503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1344 3 590 Organic Solute Cotransporters AT1G12110 66.159 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1344 - - twl:119987275 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1373 11 49852716 49862136 Ahy1g1344 1 41270214 41279503 hybridization
Ahy15g0977 15 14852691 14856366 Ahy1g1344 1 41270214 41279503 PCT