Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1227 ATGCATAAACACCACCAAAAATCTGAGCTTCAATTCGAAGAAGAAGAAAGCTTGGCCCTTTCTACCTATTCCTCATCAACACTAATTTCACCACCGAACACCAAACTAGATCCACAGACTCAAACCACTTCCACCATTTTCACACCACCAAGCCAAACCCATCAGTTCGCAATCCAAATTTCGCCCTTTTCTTCTTCATGTACACACAATCCACCAACCCAACAACACCACGAAGAACAAGAAAGCAACACAACCATAATTCCCTCTCAACATGAACACCAATGCTTCTTTCCTAACATGCCATCATCATCATCATCACAATCCCCACTCTCTTCACCCCACAAGAGACCCATAATGAACACTGCCATCACCAACCATCCCTCTTCCTTATCGCCTTCACAACTCTCCCCTCCCCGCCATAACCGCATCCAAGATCTCCCATTTCAGACACCCTTTGGGGCGAAGTTTCAACCTTTGAAGCTTCTCACACAGCCCCACTTCCGCTTCCTCATATTCCTCTCCATACCTTCCCTCTACTTCCTCCTCTCAAACCCTACTCACCGATCCTTCTTCCCTCTCGATCTCTTCTACATAATCATCTTCTCAGCATTGCTATTGCTCTCTCTCAACCTAGCACTCCCGCGACTACCCTCAATCCGCTTGTTCCTCGCTCGATCACTCCCCACAAAGCTGTCTTCATCATTTTCCACCTCAAACACTCACCAACCCGTTCTATGGTCCATTGGGTCCAACCCCAGGAACCAAAAGATCCCAAGTTCAGGTTTTTATGCTCAAATTTATAGCAATGGTGATGTGTATGAGGGTGAGTTCCACAAAGGGAAGTGTTCAGGAAGTGGGGTATATCACTACCATATGAGTGGAAGGTATGAGGGAGATTGGGTTGATGGAAGGTATGATGGCTATGGTGTTGAGACATGGGCAAGAGGGAGCAGGTATAGGGGAATGTATAGGCAAGGTTTGAGGCATGGTGTTGGAATCTATAGGTCCTACAGTGGGGATGTGTATGCTGGTGAGTGGTTCAATGGGCAGTGCCATGGCTTTGGAGTTCACACTTGCAATGATGGGAGCAAATATGTTGGGGAGTTCAAATGGGGTGTTAAACATGGGATTGGCCAGTACCATTTTAGAAATGGAGACTTCTATGCCGGCGAATATTTTGCGGACATGATGCACGGCTTTGGAGTGTACCAATTTCAGAATGGTCATCGCTATGAAGGAGCGTGGCATGAAGGAAGAAGACAAGGGCTGGGAAGTTATACTTTCAGAAATGGGGAAACACAATGCGGTCACTGGCAGAATGGGATTCTTGACGATCTGAAAATGCAGAACAATCACACTGCTTCTCCATGCGCTGTGGACCAGGCCAAGGTTTTCAATGCAGTCAATGATGCACATTCTGCTGCCGAGAAAGCTCATAACTTGGCGAAGGTAGATGTTGGGGTGAATAAAGTGGTGGCTTCGGCTAATAAATCAGCAAACGCGGCCAGAGTTGCTGCCATAAAGGCCGTACAAAATAGGATGCATCATAATAACAAGTAA 1560 0.466 MHKHHQKSELQFEEEESLALSTYSSSTLISPPNTKLDPQTQTTSTIFTPPSQTHQFAIQISPFSSSCTHNPPTQQHHEEQESNTTIIPSQHEHQCFFPNMPSSSSSQSPLSSPHKRPIMNTAITNHPSSLSPSQLSPPRHNRIQDLPFQTPFGAKFQPLKLLTQPHFRFLIFLSIPSLYFLLSNPTHRSFFPLDLFYIIIFSALLLLSLNLALPRLPSIRLFLARSLPTKLSSSFSTSNTHQPVLWSIGSNPRNQKIPSSGFYAQIYSNGDVYEGEFHKGKCSGSGVYHYHMSGRYEGDWVDGRYDGYGVETWARGSRYRGMYRQGLRHGVGIYRSYSGDVYAGEWFNGQCHGFGVHTCNDGSKYVGEFKWGVKHGIGQYHFRNGDFYAGEYFADMMHGFGVYQFQNGHRYEGAWHEGRRQGLGSYTFRNGETQCGHWQNGILDDLKMQNNHTASPCAVDQAKVFNAVNDAHSAAEKAHNLAKVDVGVNKVVASANKSANAARVAAIKAVQNRMHHNNK* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1227 519 MobiDBLite consensus disorder prediction 63 140 - -
Ahy1g1227 519 SMART morn 363 384 IPR003409 -
Ahy1g1227 519 SMART morn 271 292 IPR003409 -
Ahy1g1227 519 SMART morn 294 315 IPR003409 -
Ahy1g1227 519 SMART morn 317 338 IPR003409 -
Ahy1g1227 519 SMART morn 340 361 IPR003409 -
Ahy1g1227 519 SMART morn 386 407 IPR003409 -
Ahy1g1227 519 SMART morn 409 430 IPR003409 -
Ahy1g1227 519 Gene3D - 256 302 - -
Ahy1g1227 519 Gene3D - 303 347 - -
Ahy1g1227 519 Gene3D - 394 466 - -
Ahy1g1227 519 Gene3D - 348 393 - -
Ahy1g1227 519 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 267 372 - -
Ahy1g1227 519 Pfam MORN repeat 342 363 IPR003409 -
Ahy1g1227 519 Pfam MORN repeat 388 410 IPR003409 -
Ahy1g1227 519 Pfam MORN repeat 411 432 IPR003409 -
Ahy1g1227 519 Pfam MORN repeat 319 341 IPR003409 -
Ahy1g1227 519 Pfam MORN repeat 273 291 IPR003409 -
Ahy1g1227 519 Pfam MORN repeat 365 386 IPR003409 -
Ahy1g1227 519 Pfam MORN repeat 296 318 IPR003409 -
Ahy1g1227 519 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 83 515 - -
Ahy1g1227 519 MobiDBLite consensus disorder prediction 63 144 - -
Ahy1g1227 519 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 338 442 - -
Ahy1g1227 519 MobiDBLite consensus disorder prediction 23 50 - -
Ahy1g1227 519 PANTHER HISTONE H3 K4-SPECIFIC METHYLTRANSFERASE SET7/9 FAMILY PROTEIN 83 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1227 Ahy-Chr1 33668841 33672698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1227 384 446 Acyl Lipid Metabolism Gene Families AT2G41210 33.333 3.15e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1227 - - pvu:PHAVU_003G226200g 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1228 11 39883063 39886928 Ahy1g1227 1 33668841 33672698 hybridization