Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g0970 ATGGATCACAAACCATGGCCTTGGAGGAAAAAATCCTCAGAAAAGATAACCGTAACGACAGACAATACCAATCTCGCTTCGAAAGAAAACCAAGAGGTACAGGCTCTTCTAGCTGATAAAGAAGAATTGGAGAAAGACTTGAAAAGACTAAATGATAAGCTTACTTCGGCAATCTCTGACTGTAATGCTAAAGGTGAGCTGTTGAAAAAGCAAACAAAAATTGCTCAGGAAGCAACAGCAGGTTATGAGAAGGCAAAAGCTGAGGTGTTGTCTATGAAGCATGATTTTGATGAAGCTTTGCAGCAGAGATTAATTTATGAAGAAAGAGTAGTCCATTTGGATGGAGCTCTCAAGGAATGTATGCAACAGTTACGTTTTGTTCGAGAAGAACAAGGGCGAAGGGTTCATGATGCTGTGATGAAGGCTTCAAAAGAATTTGAAAAAGAGCGCATGGTTCTGGAGGAGCAGTTATCTGAGGTAGGTAAATGGCTAGCAAAAGCGGAGACTGAAAATTCTCATCTTAATAAGTCCATTCTTGCAAAAGAAAATCTGATTGAAGATCTGAAAAGACAATTGAATCAAGCTGAGGCAAATCATAATGCACTGATGATTAAATTAGACTCTATTGAAAAAGAAAATGCCTCTTTCAAGTATGAGGTTCGAGTCCTTGAAAAGGAACTTGAGATCCGAAATGAAGAGAGAGAGTTTAATCGCCGGACGGCTGATGTTTCTCACAGACAGCACTTAGAGAATGTTAAAAAAATTGCCAAATTAGAATCAGAATGTCAGAGGCTGCGGCTTCTGGTTCGGAAACGATTACCAGGTCCTGCTGCCCTGGCAAAAATGAAAAATGAAGTTGAAGTTTTGGGACGGGATTCATTTGAAACGAGAAGGACGAGGTTGAACTCAACCAGCAGTTTGATGGTTGAATCTTCTATTGACAGTTCTCCTGAGACTCCTGGTAGAAGAATCAGTACATTGACAGAGCAGCTATCTGCTGTTGAAGAAGAGAACAAGACTCTGAAAGAATCCCTAAATAGGAAAATGAGTGAGCTACAATTCTCAAGAGTAATGCTTTCTCGCACAGCTTCAAAACTTTTGCAACTGGAGTCACAGATTGGAGATTCGCCTAGAAGCCACTTAAACTTAGAGAAGCCTCGAAGTAACCTAGCATTACATGAGTTCTCTTTGGCATCAATGTCTGACAATGGCAGCGATGACAAGGCTAGCTGTGCTGAATCTTGGGCTTCTGCCTTGATTTCAGAATTGGAAAACTTCAAAAGCAATAAGCAGAAGGAGTCACAGTCATGCAGAAGTGTTGGAGCTTCAGACATAAATCTTATGGATGACTTCCTTGAAATGGAAAAATTAGCAATAGTCTCTGTTGAAAAAGCCCCTGAAATGTCTCATGCTTCCTCAAAAGGAGTTAATGAAATTAATGGTTTTTCAGATACTGGGATGGATGATTCTACCTTTGATGCATCAGGTAAGGAGATCGTTCGAGTGCCTGCTCGCATTTCTAATGTGTCAGTGTCTAATCAGGAAACCTCTTCCATTGATATTTTGAAAGGTAATGTTCCTGGATGGCTTCATGAAATAGTAAAATTGGTCTTGGAGCAGAGTTGCATCACTCATAAAACCCTTGATGATATATTTGAGGATGTTAGAGTAGCTTTGAGGCATCTGAATAATCCAGATCTACTTGTCTTTGATCCAACCAAAGGATCTGGTCTTATTGATCCATCTAGTGATGTAAATGATGCTGATATCTCATCAATAAAGATAGTGAAAGAACAGTCTGAGGCAGATCTGAGTAAATCGATAGGCAAGATAGTTGAGCTCATTGAAGGAATCAGTGTGCCTGCTGTGGATTATGATGGTTTGGATCCCTTGTGCGGAAGAGATGGGAATAATCTTTCACATAAGGTTCTAGGAATGCCAACAGGATACATGGTCCGTGTTTTCCAGTGGAAAACTTCAGAACTAGCTAACGTTTTGCAACATTTTCTCCATGTATGTTATGATTTACTGAATGGCAAGGCGGATCATGGAAAATTTGCTGAGGAATTAACAACTGCTTTGGATTGGATTATGAATCACTGCTTTTCGATCCAGGATGTTTCTAGTATGAGGGATGCCATCAAGAAACAATTTGATTGGGACGAGACCCGAAGTGAAAGTGAAGCAGAGGCAAGTCTTTTTACAGGGGCAGATAAGTTGCCTCAAGTAACTACTGCTGGTGGTGATGATCTACATACTGGAGAGATGTATTATGCCGAGAAAGAAGAATTAAAAAATATTAAAGATAAATTGGTCAGTGCTGAATCTCAAAGGGGAGCCTTGGAAGGGAGACTTAAATCAGCTACTGACAGGATTGAATCATTAATAAGTCAACTCCAAGAATCTGAGAAAACTATTACCAGCTTGACATCAGATTTACAAAGCTTAAAAGAATCAAATGCAGTACTTGAGGGTCAAATAAAAAAGCTCAAATTGGCAAATTCAGATCTCGATGTACAGCATAAAGAAGCTGAATTGAAAGAGGCTTATCACAAGGTTTTCACATTAGAAGTGGAACTGGAGAACAAAACTCACTGTTGTGAAGACTTAGAGACCAGATGTCTTGAATTGCAGCTCCATCTTGAAAGCATGTCAAAGAACTGCTCAAACAATGCTATTGACCATAAAGATAAGCCACTGCGAACTGATTGGGAGATAACAGCTGCTTCAGAGAAGCTGGCCGAGTGTCAAGAAACCATTCTTAACCTTGGAAAGCAGTTGAAGGCGATAGCTGCACCAAAGGATGCAGCTCTTTTTGACAATGCCATTGCTAATGCAGTTACCAACACGGCACCAGCCAATACCTCGCATGTGGGTCCAAGTCCTGCCCTCGAGAAAGATATGAGAGTGAAAAATCGATCCCTGCTCGATCAAATGCTGGCCGAAGATGATAGTAAGGCCAAGGTTTCGAAAGAAAGTGATGGCAAAACAACTCACTCCAACATTCCTGGCAATATAGAGACCCTGGAAAAGATTTTAGTTTTGAATGGAACTAAAGGCAATGACGATGAGGATGCTGTTAATTCTTTGGCCATTGTTCCTGCAAAGAAACAGGGCAGTGGAAGTTTGTGGAAGAAATTATGGAGAAAAAAGAAAAGTGCCAACAAGAAAGCACCACTTCCATCATCTAACATATGA 3198 0.4034 MDHKPWPWRKKSSEKITVTTDNTNLASKENQEVQALLADKEELEKDLKRLNDKLTSAISDCNAKGELLKKQTKIAQEATAGYEKAKAEVLSMKHDFDEALQQRLIYEERVVHLDGALKECMQQLRFVREEQGRRVHDAVMKASKEFEKERMVLEEQLSEVGKWLAKAETENSHLNKSILAKENLIEDLKRQLNQAEANHNALMIKLDSIEKENASFKYEVRVLEKELEIRNEEREFNRRTADVSHRQHLENVKKIAKLESECQRLRLLVRKRLPGPAALAKMKNEVEVLGRDSFETRRTRLNSTSSLMVESSIDSSPETPGRRISTLTEQLSAVEEENKTLKESLNRKMSELQFSRVMLSRTASKLLQLESQIGDSPRSHLNLEKPRSNLALHEFSLASMSDNGSDDKASCAESWASALISELENFKSNKQKESQSCRSVGASDINLMDDFLEMEKLAIVSVEKAPEMSHASSKGVNEINGFSDTGMDDSTFDASGKEIVRVPARISNVSVSNQETSSIDILKGNVPGWLHEIVKLVLEQSCITHKTLDDIFEDVRVALRHLNNPDLLVFDPTKGSGLIDPSSDVNDADISSIKIVKEQSEADLSKSIGKIVELIEGISVPAVDYDGLDPLCGRDGNNLSHKVLGMPTGYMVRVFQWKTSELANVLQHFLHVCYDLLNGKADHGKFAEELTTALDWIMNHCFSIQDVSSMRDAIKKQFDWDETRSESEAEASLFTGADKLPQVTTAGGDDLHTGEMYYAEKEELKNIKDKLVSAESQRGALEGRLKSATDRIESLISQLQESEKTITSLTSDLQSLKESNAVLEGQIKKLKLANSDLDVQHKEAELKEAYHKVFTLEVELENKTHCCEDLETRCLELQLHLESMSKNCSNNAIDHKDKPLRTDWEITAASEKLAECQETILNLGKQLKAIAAPKDAALFDNAIANAVTNTAPANTSHVGPSPALEKDMRVKNRSLLDQMLAEDDSKAKVSKESDGKTTHSNIPGNIETLEKILVLNGTKGNDDEDAVNSLAIVPAKKQGSGSLWKKLWRKKKSANKKAPLPSSNI* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g0970 1065 MobiDBLite consensus disorder prediction 1037 1065 - -
Ahy1g0970 1065 Coils Coil 171 226 - -
Ahy1g0970 1065 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 1059 - -
Ahy1g0970 1065 MobiDBLite consensus disorder prediction 982 1003 - -
Ahy1g0970 1065 Coils Coil 26 60 - -
Ahy1g0970 1065 Coils Coil 757 847 - -
Ahy1g0970 1065 Pfam Filament-like plant protein, long coiled-coil 64 937 IPR008587 -
Ahy1g0970 1065 SUPERFAMILY Tropomyosin 761 896 - -
Ahy1g0970 1065 Coils Coil 867 887 - -
Ahy1g0970 1065 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1059 - -
Ahy1g0970 1065 Coils Coil 324 351 - -
Ahy1g0970 1065 Coils Coil 82 102 - -
Ahy1g0970 1065 Gene3D - 759 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g0970 Ahy-Chr1 15502155 15508770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g0970 - - aprc:113858788 1422.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0964 11 19943478 19950012 Ahy1g0970 1 15502155 15508770 hybridization
Ahy5g0618 5 7909263 7914571 Ahy1g0970 1 15502155 15508770 PCT
Ahy1g0970 1 15502155 15508770 Ahy5g0618 5 7909263 7914571 PCT